Sporisorium graminicola: EX895_000381
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Entry
EX895_000381 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
sgra
Sporisorium graminicola
Pathway
sgra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EX895_000381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgra03021
]
EX895_000381
Transcription machinery [BR:
sgra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
EX895_000381
Prokaryotic type
Archaeal type
TFB
EX895_000381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
RB_B
AlphaC_N2
Motif
Other DBs
NCBI-GeneID:
40723276
NCBI-ProteinID:
XP_029742368
LinkDB
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Position
SGRAM_1:join(981967..981996,982201..983298)
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AA seq
375 aa
AA seq
DB search
MTADNQRSSQNAFTQPFALSARYAADRGDAPKGEDDFVPDLNVRLICRDCKTDPPNLAEE
FESGDLVCADCGLVVGENIIDTRSEWRTFANEDGDDPSRVGAASNPLLDGINEQLESRIG
FRDGGTGASRDLQRTMNRATGTRDRHMLDAFEDIQRKCDSIHLPRTVSDVAKQAYRRVEE
EKILRGKKPDAIIAAAIYVACKMNHVPRTFPEICSLTSVSKKHIGQCFKEMQQAFGLNAT
GTGSVDGSRASPNNSGTSTPIGIGPTGAADLVGRYCNHLGLEMRITRSTEDITARVRELG
ILAGRSPITIAAACIYFSTLLWGVDKGAKRISQAAGVSDVTIKNSFKELLKHKEKIATPE
ILSKSPQMDLSRLDA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgacaaccagagatcctcacagaatgcattcacgcagccttttgcactgagc
gctaggtatgccgccgaccgtggcgatgctccaaagggcgaggatgacttcgtgccggac
ctcaacgtccgactcatctgccgtgactgcaagacggaccctcctaatttggccgaagag
tttgagtctggcgacctggtctgcgccgattgcggactcgtggtgggcgagaacatcatc
gacactcgctccgaatggcgtacgtttgccaacgaggacggcgacgacccctcgcgtgta
ggcgcagcgagcaatccgctgctggatggtatcaacgagcagctcgagtcgcgcatcgga
ttcagagatggcggcacgggtgcctcgagggatctgcagaggaccatgaaccgcgccacc
ggtacgagggaccggcacatgctggatgcgtttgaagacattcagcgcaagtgcgactcg
atccatctgcccaggacggtttcggacgtcgccaagcaggcgtatcgacgagtggaagaa
gaaaaaatccttcgcggaaagaagccggacgccatcatcgcagctgccatctatgtggcc
tgcaagatgaatcacgtgccccgaacctttcccgaaatctgctcgctcacgagcgtctcc
aagaagcatattggccagtgcttcaaagagatgcagcaggcgttcggtctcaatgccacg
ggcacgggttcagtggacggatcgagggcgagtccaaacaacagcggcacatcgacgccg
atcggtattggaccgacgggcgcggccgacctcgtcgggcgctactgcaaccacctgggc
ctcgagatgcgcatcacacgttccaccgaggacattactgcgcgggtccgcgagctgggt
atcttggccggtcgcagtcccatcacaattgctgcggcctgcatttacttttcgacgctg
ctgtggggcgttgacaaaggagctaagcgcatcagtcaggcggcgggtgtgagcgacgtt
acgatcaagaactccttcaaggagctgctcaagcacaaggagaagatcgccacgcccgag
atcctctcaaagagccctcagatggatctctcgcgcctcgatgcgtga
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