Sporisorium graminicola: EX895_000393
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Entry
EX895_000393 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
sgra
Sporisorium graminicola
Pathway
sgra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EX895_000393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgra03041
]
EX895_000393
03032 DNA replication proteins [BR:
sgra03032
]
EX895_000393
Spliceosome [BR:
sgra03041
]
Complex A
U1 snRNP components
Sm proteins
EX895_000393
U2 snRNP components
EX895_000393
Complex B
U1 snRNP components
EX895_000393
U4/U6.U5 tri-snRNP components
EX895_000393
Complex C
U2 snRNP components
EX895_000393
DNA replication proteins [BR:
sgra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
EX895_000393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
40723288
NCBI-ProteinID:
XP_029742380
UniProt:
A0A4U7KZW2
LinkDB
All DBs
Position
SGRAM_1:join(1017184..1017188,1017281..1017611)
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AA seq
111 aa
AA seq
DB search
MSQYLNVPKSELDQSQIRELEQYEISQGPLSVLQQSVRNHTQILIALRNNKKLLARVKAF
DRHSNMVLENVKEMWTEVPKGKGKKPVNKDRFISKMFLRGDSVVLVLRNTA
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatatctcaacgtaccaaagtccgaactggaccaatctcagatccgagagctc
gagcagtacgagatctcccaaggtcccctttctgtgctacagcaatctgttcgcaaccac
acccagatccttatcgcacttcgcaacaacaagaaactcctcgcaagagtcaaggccttt
gaccgtcactcgaacatggttctcgagaacgtcaaggagatgtggaccgaggtgcccaag
ggtaagggaaagaagcccgtcaacaaggaccgcttcatctccaagatgttccttcgcggc
gactcggtcgttctcgtcctacgaaacactgcttag
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