Sporisorium graminicola: EX895_000406
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Entry
EX895_000406 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
sgra
Sporisorium graminicola
Pathway
sgra03030
DNA replication
sgra03410
Base excision repair
sgra03420
Nucleotide excision repair
sgra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EX895_000406
03410 Base excision repair
EX895_000406
03420 Nucleotide excision repair
EX895_000406
03430 Mismatch repair
EX895_000406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgra03032
]
EX895_000406
03036 Chromosome and associated proteins [BR:
sgra03036
]
EX895_000406
03400 DNA repair and recombination proteins [BR:
sgra03400
]
EX895_000406
DNA replication proteins [BR:
sgra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
EX895_000406
DNA Replication Termination Factors
ELG1-RFC complex
EX895_000406
Chromosome and associated proteins [BR:
sgra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
EX895_000406
DNA repair and recombination proteins [BR:
sgra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
EX895_000406
Check point factors
HRAD17(Rad24)-RFC complex
EX895_000406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
AAA_11
AAA_16
RuvB_N
AAA_assoc_2
AAA_14
Mg_chelatase
AAA_30
AAA_24
AAA_28
AAA_2
AAA_5
DEAD
AAA_7
ResIII
SLFN-g3_helicase
AAA_19
AAA_3
DUF815
nSTAND3
Gp44_lid
bpMoxR
AAA_23
RNA_helicase
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
40723301
NCBI-ProteinID:
XP_029742393
LinkDB
All DBs
Position
SGRAM_1:join(1056046..1056569,1056679..1057312)
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AA seq
385 aa
AA seq
DB search
MFLQQASKAHNAGQAAQKEKLAKEKAAMRPWVEKYRPKTIDDVAAQEHTVAVLKKTLMSN
NLPHMLFYGPPGTGKTSTILALARQLFGPELMKTRVLELNASDERGISVVREKIKNFAKL
AVTNPKEGFPCPPFKIIILDEADSMTQDAQSALRRIMEQYSRITRFCLVCNYVTRIIEPL
ASRCSKFRFRSLDSSSTKTRLEMIASAESVSFQDSTVLDTLISTSDGDLRRAITYLQSAS
RLHSIASDDKSSVTSESIIEIAGVVPTRVITGLADAVGIEAYSSDDDVEMEAVGVAAKKR
EAFERIREEVRIITREGYSITQLLVQLHDYVIAHPTVLAKIKAKAALLMAEMDKCLTDGA
DEELQLLNLCLKLQEVVQTDGKAYV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgttcttacaacaagcatcgaaagcacacaatgctggtcaggcagcacagaaggagaag
cttgccaaggaaaaggccgccatgcgcccatgggtggaaaagtaccgccccaagaccatc
gacgacgtggccgcacaggaacacacggtcgccgtgctcaaaaagacgctcatgtccaac
aacctcccgcatatgctcttttacggacctcctggtactggcaagacatccaccatcctc
gcattggcacgacagctgtttgggcccgagctcatgaagacgcgagtgctcgagctcaac
gcctcagacgagagaggtatcagtgtggtcagggagaagatcaagaactttgcaaagctc
gccgtcaccaacccaaaggaaggctttccgtgcccacccttcaagatcatcattctcgac
gaggcggatagcatgacccaggatgcgcagagtgcattgaggcgaatcatggaacaatac
agcaggatcacgaggttctgtctggtttgcaactatgtcactcgcatcatcgagccgctc
gcctcacgttgcagcaagttccgtttccgctcgctggacagctcctccaccaagacccga
ctcgaaatgatcgcctctgccgaatctgtctcgttccaagattccaccgtcctcgatacc
ctgatcagcacttcagacggcgacttgcgacgcgccattacctacctgcagtccgcctcg
cgcctccacagcatcgccagcgacgacaaatcctctgtcacttccgagtccatcatcgag
atcgcaggcgttgttcccacccgcgttatcaccggcctcgcagatgccgtcggcatcgaa
gcgtacagctcggacgacgatgtcgagatggaagccgtcggcgtggcggcaaagaagaga
gaagctttcgagcggatcagagaagaagtgaggatcattacgagggagggatactcgatc
acacagctgctggtgcagctgcatgactatgtgattgcccatccgactgtgttggcaaaa
atcaaggcaaaagctgctttgctcatggcagagatggacaagtgcctgacggacggtgcc
gacgaggagctgcagctgctcaatctgtgtctcaagttgcaagaggttgtgcagaccgat
ggcaaggcttacgtctga
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integrated database retrieval system
