Sporisorium graminicola: EX895_000535
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Entry
EX895_000535 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
sgra
Sporisorium graminicola
Pathway
sgra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EX895_000535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgra03400
]
EX895_000535
Enzymes [BR:
sgra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EX895_000535
DNA repair and recombination proteins [BR:
sgra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EX895_000535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
40723430
NCBI-ProteinID:
XP_029742522
UniProt:
A0A4U7L1G3
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All DBs
Position
SGRAM_1:complement(1427333..1428424)
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AA seq
363 aa
AA seq
DB search
MQWVSNPIPETSAQSFKHRVAQHDYMPLPSSVKKENSDAPRSDKDYGYVVPHGCYLVNLA
NPEEAKREKSFEAFIDDLQRCEQLGIRLFNFHPGSMTAASASGEEPPDVGPLSQVRAAKA
DACTLVASYINRAHSLTSSVVILIENMAGSKNDTILGSSLRDLAAMISGVTDKARVGVCI
DTCHAFAAGYDLTSPTSYAAFTSLIEETVGWQTVRAFHLNDSKFPLGCKRDRHANIGRGH
IGLGGFWCIVNDDRWNGIPLILETPALGNASSAYPAKEATKKMHEVWGYQIQALYALRGT
KWGEWKVAEEWLRRADEVVAQAEKLHAVKKGAKGSNKKPKAKVGKKKQASEEETDESELS
SDE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggtctcgaatccgatccccgaaacatctgcccagagtttcaagcatcgtgta
gcgcagcacgactacatgccgctcccttccagcgtcaaaaaggaaaactctgatgcgcca
cgcagcgacaaagactacggctacgtcgttccgcatggatgctacctggtcaaccttgcc
aatccggaggaagccaaacgcgagaaatcgttcgaagcgtttatcgacgatctgcaacgc
tgcgagcaattgggcatccgcctgttcaacttccatccaggctcgatgaccgccgcgtca
gcatccggggaagagccaccggatgtcgggccattgtcgcaagtccgagccgccaaagca
gatgcgtgcaccctcgttgcgtcatacatcaaccgcgcccactcgctcacgtcctccgtc
gtcatcctgatcgagaacatggccggctcgaaaaacgataccatcctcggctcttccttg
cgtgacctcgccgccatgatctcgggagtcacagacaaggctcgtgttggagtgtgtatc
gatacatgtcacgcctttgccgcggggtacgacttgacttcccccacctcgtacgccgcg
ttcacgtcgctcatcgaagaaaccgtcggatggcaaaccgtccgagcattccacctgaac
gactccaagttcccgctaggatgcaagcgcgatcgacacgccaacattgggcgcgggcat
atcggacttggcggattctggtgcatcgtcaacgacgacagatggaacgggatcccgttg
attctagaaacgccggcactgggcaatgcgtcgtctgcatatccggcaaaggaagcgacg
aagaagatgcacgaggtgtggggctatcagatccaggcgttgtacgcattgaggggtacc
aagtggggagagtggaaggtggccgaggagtggttgcggcgagcggacgaggtggttgcg
caggcggaaaaattgcacgcggtaaagaagggggcaaagggatcgaataagaagccgaaa
gctaaagtgggcaaaaagaagcaggctagcgaagaggaaacggatgaaagcgagctgagc
tcggacgagtga
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