Sporisorium graminicola: EX895_000751
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Entry
EX895_000751 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
sgra
Sporisorium graminicola
Pathway
sgra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EX895_000751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_000751
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EX895_000751
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
EX895_000751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
DUF6115
Motif
Other DBs
NCBI-GeneID:
40723646
NCBI-ProteinID:
XP_029742738
UniProt:
A0A4U7L0T7
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Position
SGRAM_1:complement(join(2091296..2092836,2092924..2093106,2093184..2093196))
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AA seq
578 aa
AA seq
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MQRPVSANQRQNYPLPAFANRLPHTNNSASPTSSPGPGINAAMYPYLQGGPRMMGSFPGM
PQSQQGGAGAFPFGGSGSNNTTGAASLASQLAGLSGQSGGQSQGQGQGGELNLSDFPALG
GGQAQQGGAPGLGGLNQPLSSYATQAGTGGVTAALRGGAPLRNFNQDEFPALNQTSSTDG
RTGDDGFPRGVAEQVSAAAALQHQHQQREQHRQSMLGSVVGGGARTDASLSAARGGFGEP
DRNYATKLGAGPPGPGLGVQQQTWAPPGSLFGGGNNGVAAPNQLNGLPRSSSPSSARSPL
SSVRNAAGNLGASSPLTDNASIRGDAIQGAAGSQSLGQTGAMARTPAQQILTSPADRFGL
LGLLSLIKSSDPDLSMLSMGVDLQTFGLNLNQSDPLHPSFITPWSENNMLASSRVEPEFT
LPSCYNVQPPPPAQSKIASFSDETLFFIFYSTPRDVLQEVAAQELYARNWRYHKELHVWL
TKEQNTEPLQKTPTYERGTYVFFDPSVWEKVSKNFHLMYEMLEEKVPSQAQALAAQAAAQ
QAAAVAAAQQQQQQQQRPPSQQQQQQSPSPAPQQQQSS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagaccagtttccgcaaaccaacggcaaaactatccgctccctgctttcgcaaac
aggcttccgcatacgaacaattccgcatctcctacgtccagcccaggtccgggcatcaac
gcagctatgtatccataccttcaaggtggcccgcgcatgatgggctccttcccaggtatg
ccgcaatcacaacaaggtggtgctggtgcctttccattcggcggatcagggtccaataac
acgacaggtgcagcgagtttggcatcgcaattggctgggctctcaggccaatcgggaggg
cagtcgcaagggcaaggtcaaggaggcgagctcaatctcagtgatttcccagcattggga
ggaggccaggctcagcaaggtggcgcgcccggccttggcggtctcaaccaacctctgtca
agctatgcgactcaggctggcactggtggcgtaacagcggcccttcgtggcggtgcgccg
ttgcgcaacttcaaccaggacgagtttccagcactcaaccagacaagctcgacagatgga
cgcaccggtgacgatgggttcccgcgcggagtcgcagaacaggtttcagcagcagcagca
cttcagcaccaacatcagcaacgcgaacagcacagacagagcatgttggggtccgtagtc
ggtggcggtgcacgaaccgatgcatccttgtcagcagcgagaggtggatttggcgagccg
gaccgcaactacgccaccaagctcggcgcaggaccacctggaccaggattgggtgttcag
caacagacgtgggcgccaccaggctcgctcttcggcggcggcaacaatggagtggcagca
ccgaatcagctcaacgggctcccgcgctcgtcttcgccctcttcggcacgatcgccgctg
tcgagcgtccgcaacgcagctggcaacctcggcgcatcttcacctttgaccgacaacgct
tcgattcggggtgacgcgatccagggtgcggccggctcccaaagtctcggccagacgggt
gcgatggcgcgaacacctgcgcagcagattctcacctcgccagcggatcggttcgggttg
cttggtctgctatcgctgatcaagtcgtcggatccggatctgtcgatgttgtccatggga
gtggatctgcaaacgtttggtctcaacttgaaccagtcggatccgctgcatccgtcgttc
atcacgccctggtcagaaaacaacatgctggcttcgtcgagggttgagcccgagttcacc
ttgccgtcgtgctacaacgtgcagcctccgccgcctgcgcagagcaagattgcgtcgttc
tcggacgagacgctgttcttcatcttctactcgacaccgcgcgacgtgctgcaggaggtg
gcggcgcaggagctgtatgcgcgcaactggaggtaccacaaggagctgcatgtgtggttg
accaaggagcagaacacggagcccttgcaaaagacgccgacgtacgagcgcgggacctac
gtgtttttcgacccctccgtctgggaaaaggtgtcgaagaacttccatctcatgtacgag
atgctggaggagaaggttcccagccaggcacaggcgctggcggctcaagcagcggcccag
caggcagcggcggttgcggcggctcaacagcaacagcagcagcagcagagaccaccgtcg
cagcagcagcaacagcagtccccgtcgcctgcgccgcagcagcagcagtcgtcgtaa
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