Sporisorium graminicola: EX895_000894
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Entry
EX895_000894 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_000894
03036 Chromosome and associated proteins [BR:
sgra03036
]
EX895_000894
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
EX895_000894
Chromosome and associated proteins [BR:
sgra03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
EX895_000894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
HeH
SAP_new25
Motif
Other DBs
NCBI-GeneID:
40723789
NCBI-ProteinID:
XP_029742881
UniProt:
A0A4U7L279
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All DBs
Position
SGRAM_1:complement(2517694..2518962)
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AA seq
422 aa
AA seq
DB search
MSSSLTVEQLRSKLQHLGLDTKGKKADLRSRLRKAIRNGSNSPPAPSDESKVPHTTWEPE
FDTFLVLDVEATCEATRKYRNLQHGFETGNFQYPNEIIEFPVVLLRWNQNLHQFDTAGVF
HSYVRPTFRPRLTKFCRDLTGVTQAQVEAAPTWSSVVENFFQFLLSHDLVEDTSKGKSHL
HNFRLRRGVVWVNHGPADLRDFVIKQCWISGHPRDKNDGAPPIFLRGPLIDIRKGIASLF
KWEQELKIELSRAASSRSTPFPEFGGEDGFQVISPPPNQNPPVVKEDARTTGLTPHEQSL
AGLLDLLNIGPFQGRQHCGMDDTRNIARLIVEVARRIALAARGTQVLLSKSYESVDGQME
ASAAVMQLDAQPGPMRARQMEKLVLKPNVRLDGVQKRFFWMGKAVGEVRWPFPPEVEQEG
AE
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccagcttgacggttgaacagctccgttccaaactgcagcatctcggtctcgat
acgaagggcaagaaagccgacctgcgatcccgcctcaggaaggcgatacgaaacggaagc
aatagtcctccagctccctcagacgaatccaaagtgcctcatacgacatgggaacctgaa
ttcgacaccttcttggtgctagatgtagaggcaacctgcgaagcaacacgcaagtaccgc
aacctgcagcacggctttgagacgggcaacttccagtacccgaacgagatcatcgagttt
cccgtcgttcttctcagatggaaccaaaatttgcatcagttcgatacagcaggcgtgttt
cattcctacgttcgaccgacgtttcgtccccggctgaccaagttctgtcgtgacttgaca
ggtgtcacgcaggcgcaggtcgaggcggctcctacttggagcagtgtagtcgagaacttc
tttcagttcttgctctcacacgatctcgtcgaagatacatccaaaggaaaaagccacctg
cacaacttccggttacggcgcggcgtcgtttgggtcaatcacggccccgccgatttgcgc
gactttgttatcaagcagtgctggatatccggtcatccacgcgacaagaacgacggtgct
ccaccgatcttcctgcgcggtcccttgatcgacatccgcaaaggcatcgctagcctgttt
aaatgggagcaagagctcaagatcgagctgagccgcgctgcttcttcgcgctctacgccc
ttccccgagtttggaggcgaggacggatttcaagtcatctctccaccccccaatcaaaac
ccaccggtcgtgaaggaggatgcgcgcaccaccggcctcacaccgcacgaacagagtcta
gccggcttgctcgacctcttgaacatcggacctttccaggggcgtcagcattgcggcatg
gacgatacccggaatattgcccggctcattgtagaggttgctagacgcatagcgctcgct
gcgcggggcacgcaagtgctgctctccaaaagctacgaatcggtcgatgggcagatggag
gcgtcggcagctgtgatgcagcttgatgcgcaaccagggccgatgagggcgagacagatg
gagaagttggtcttgaagccgaatgtaaggctggatggcgtgcagaagagattcttctgg
atgggcaaggctgtgggggaggtcaggtggcccttcccgcccgaggtggagcaagagggt
gctgagtga
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