Sporisorium graminicola: EX895_000963
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Entry
EX895_000963 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
sgra
Sporisorium graminicola
Pathway
sgra03030
DNA replication
sgra03410
Base excision repair
sgra03420
Nucleotide excision repair
sgra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EX895_000963
03410 Base excision repair
EX895_000963
03420 Nucleotide excision repair
EX895_000963
03430 Mismatch repair
EX895_000963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgra03032
]
EX895_000963
03036 Chromosome and associated proteins [BR:
sgra03036
]
EX895_000963
03400 DNA repair and recombination proteins [BR:
sgra03400
]
EX895_000963
DNA replication proteins [BR:
sgra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
EX895_000963
DNA Replication Termination Factors
ELG1-RFC complex
EX895_000963
Chromosome and associated proteins [BR:
sgra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
EX895_000963
DNA repair and recombination proteins [BR:
sgra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
EX895_000963
Check point factors
HRAD17(Rad24)-RFC complex
EX895_000963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_16
AAA_14
AAA_22
AAA_3
nSTAND3
RuvB_N
Rad17
RCF1-5-like_lid
Viral_helicase1
Mg_chelatase
AAA_24
AAA_5
AAA_11
Gp44_lid
AAA_assoc_2
MeaB
NTPase_1
MipZ
Motif
Other DBs
NCBI-GeneID:
40723858
NCBI-ProteinID:
XP_029742950
UniProt:
A0A4U7L197
LinkDB
All DBs
Position
SGRAM_1:join(2720741..2721658,2721739..2721855)
Genome browser
AA seq
344 aa
AA seq
DB search
MTQPSASSAAPAAAAAATTGYELPWVEKYRPMRLDDVVGNRDTIERLKVIQKDGNCPHLL
ISGLPGIGKTTSVLCLARALLGDAYKEGVLELNASDERGVDVVRNKIKTFAQKKVSLPPG
RHKIVILDEADSMTPAAQQALRRTMEIYSNTTRFCFACNQSNKIIEPIQSRCAILRYGKV
RDEQILKRLLEICEMESVEYSDEGLAAIIFTTEGDMRQAINNLQSTWTGLGFVSPDNVFK
VCDQPHPFLIRKLLLSCKTGDIDDALEKLDEIWSKGYAAVDIVTTLFRVVKTLDGIPEAT
KLEFIKEIGWTHMRILEGVATVVQLGGLIARLCKLSMDPKQFQV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgactcagccgtcggcatcctctgctgcaccggcagcggcagcagctgccaccaccggc
tacgagctgccgtgggtagaaaagtatcgccccatgcgactcgacgatgtggtcggcaac
agggacaccatcgaacgactcaaagtgattcagaaagacggcaactgtccgcatctgctc
atctctggtctgcccggtatcggcaagaccacgtcggttctgtgtctcgctcgtgctctg
ctgggcgatgcgtacaaggaaggcgtgcttgagctcaacgcctcggacgagcgaggtgtc
gatgtggtgcgcaacaagatcaagacatttgctcagaaaaaggtgtcgctcccaccgggc
aggcacaagatcgtcatcctcgacgaggccgacagcatgacacccgctgcccagcaggct
ttgcgtcgaaccatggagatctactccaacaccactcgcttctgcttcgcctgcaaccag
agcaacaagattatcgaacccattcagtcgagatgcgccatcctgcgctacggcaaagtg
agggatgagcagatcctcaagcgcttgctcgagatttgcgagatggaaagcgtcgagtac
tcggacgaaggtctggcggccattattttcactaccgagggcgacatgcgacaggccatc
aacaatctgcagtccacctggaccggtctcggctttgtgagccccgacaatgtgttcaag
gtgtgcgatcagccgcatcccttcctcatccgaaaactcttgctctcgtgcaagaccggc
gatatcgacgacgccctggagaagctcgacgagatttggtccaaaggctatgcggctgtc
gacattgtcacgaccctcttccgcgtggtaaagacgctcgacggcattccagaagctacc
aagctcgagtttatcaaggaaatcggctggactcatatgaggatcctcgaaggggttgcc
accgtcgtgcagctcggcggtctcattgcgaggctttgcaagctcagtatggatccgaaa
cagttccaggtataa
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