Sporisorium graminicola: EX895_001012
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Entry
EX895_001012 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K24155
rabconnectin-3a
Organism
sgra
Sporisorium graminicola
Pathway
sgra04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
EX895_001012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgra04131
]
EX895_001012
Membrane trafficking [BR:
sgra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
EX895_001012
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
EX895_001012
RAVE complex
EX895_001012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
40723907
NCBI-ProteinID:
XP_029742998
UniProt:
A0A4U7L1F9
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All DBs
Position
SGRAM_1:2888551..2890902
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AA seq
783 aa
AA seq
DB search
MDWSPSPLSCSVLAVAFEHHVDIIAPGRSSTVEDKKSGLGPQWQLLLRLDLQTCTPSSIR
AACWLSSEQLAIASGSVLLVYGPWVQWGLQDGTRSKKTHLAELVAEVGGPVVQYHPTFLL
QCAVWQKLDLAKAIISNLNKAVLACSAHDVGGTWAFEEVYLDAVLGTDPIARSGTSGSAA
PLIHTGFRGGIFDEADHKDEPDGADLFASDQIDQLARHLQEIHPPHLSTSDLPVLVNLIK
TIGEAVREHRSLDSSGLRYTLALRQMLNSAAQSKGAECGADDGLGYRDFLWAFHSNSQET
LLAAIESTYQNKLDLPAARATGLFVWLRNPSALRTQAEAVARAQFMSGEDRDPVKCSLLY
FALGKRKVVQGLWRQAVWHPEQKKMLQFLSHDFDEERWKTAAQKNAFALLSQRRYEFAAS
FFMLGDSLRDAINVCVRNLDDLPLAIALARIQEGRDDGPVFTELLKNRVLPLAFERGDRW
MGSWAFWTLKRRDLAVRIIVTPLRDLIADEDVAGLLGSTVICGNDSYSDPALALLFQQLR
TKSLQTIKGLYDIPEKKVFDFVLNTNRALSRMGCHAIGLSLLRNWQFEPPSVSSASTQFH
RISRHDLETLSLVDEAVLAESTDAFSELRLTDASTHDALGESSAKSPTSHRRRTSQSTIS
PPSSPRMLRRRSSLLQRRSSIINDLDIGAAVVRPDIKIGAPDAVSKTRLADVSKTASAEE
TKKEVLRAEPSTMKAANGHPKERDGKAADAPEPKKQGISVFKSAAASNSQQGAQEFDFSS
FGF
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggactggtccccgtcgccattgtcctgtagcgtccttgctgtggccttcgagcaccac
gtcgacatcatcgctcccggacgatcttctaccgtcgaagacaagaagtcaggactgggg
ccgcagtggcagcttctgcttcgactcgacctgcaaacctgcacgcccagctcaatccgt
gcagcttgctggttgagctcagagcagcttgcgattgcttctggctcggtgctcctcgtc
tacgggccctgggtccagtggggcttacaagatgggacaaggtcgaagaagacgcatctc
gctgagcttgtcgccgaagtcggtggacccgtggtgcaataccacccaactttcttgctg
caatgcgctgtttggcaaaaactcgacctagcaaaggcgatcattagcaatctcaacaag
gccgtccttgcttgcagcgctcatgatgtcggcgggacctgggcgttcgaggaggtttat
ctcgacgccgtccttggaaccgaccccatcgcacgtagcggaacctcgggctcagcagcg
ccgctaatccacacgggcttccgaggtggcattttcgacgaggcggatcacaaagatgag
ccagacggagccgaccttttcgcgagcgaccaaattgatcagctcgctcgccacctccag
gaaatccatccgccgcacctctcaacttcagatctccccgtactcgtcaacctgatcaag
accataggcgaagcggttcgagagcatagaagcctggattcgtctggcttgcgctacacg
cttgctctacgccagatgctgaacagtgcagcccaatccaagggtgcggagtgtggggcg
gacgacggtctcggataccgcgacttcttgtgggcgttccatagcaatagtcaggaaacg
ctgctcgccgcgatcgagtctacctaccagaacaagctggatttgcctgccgctcgggcg
accggcctcttcgtctggcttcgaaatccgtcggcactccgaacgcaggcggaagccgtc
gccagggcgcaattcatgtcgggcgaggaccgcgatcccgtcaagtgctcgctgctttac
tttgctttgggtaagcgcaaggtcgtgcagggactatggcggcaagcggtgtggcatccg
gagcagaagaagatgctccaatttctgtcgcacgactttgatgaggaacgctggaagacc
gcagcgcaaaaaaatgcctttgcgctgctaagccagcgccgctacgaatttgccgcgtcc
ttcttcatgcttggcgacagtctgcgggatgctattaatgtttgtgtccgcaacttggac
gatttgccgcttgcgatcgctctggcgaggattcaagagggccgcgacgatgggcctgtg
tttacagaactgttgaagaaccgcgtgctgcctctggcgttcgagagaggtgatcgatgg
atgggtagctgggcgttctggacgctgaagcgtcgagatcttgcggtgcgcatcattgtc
actccgttgcgagacctgatcgcggacgaggacgtcgcgggcttgctgggctcgacagtc
atttgcggaaacgacagctacagtgatcctgctcttgcgctcctatttcagcaactgcgc
accaagtcgctgcagacgatcaagggtctgtacgacattccggagaagaaggtgtttgac
tttgtgctcaataccaacagagctctgtctcgcatgggttgccatgcgattggactgagc
ctgttgcgcaactggcagtttgagccgccttcggtgtcgagcgcctctacgcagttccat
cgaatatcgagacatgatctcgagacgctgtctctggtcgacgaagcggtgctggctgaa
agcaccgatgcgttcagcgagctgcgtcttacagacgcgagcacccacgatgcactcggc
gaatcatctgcaaaaagcccaacctctcatcggcgacgcacatcacagagcaccatctcg
cccccaagcagtccgagaatgcttcgtcgccgaagcagcttgctgcaacgcagatcgagc
atcatcaacgacctcgacattggtgcagcggtggttcggccagacatcaagatcggggca
cctgacgcggtgtcgaagactcgcctggcagacgtgagcaaaacggcaagtgcagaggag
acgaagaaagaagtactccgtgccgagccttcaacgatgaaagcggcgaacggacacccc
aaggagcgagatggcaaggcggcagatgcgcccgagccaaagaagcagggtatcagtgtc
ttcaaaagtgctgctgctagcaacagccagcagggtgcacaagagtttgactttagcagt
tttggcttttga
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