Sporisorium graminicola: EX895_001088
Help
Entry
EX895_001088 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgra03016
]
EX895_001088
Enzymes [BR:
sgra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
EX895_001088
Transfer RNA biogenesis [BR:
sgra03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
EX895_001088
Prokaryotic type
EX895_001088
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Pop8
Motif
Other DBs
NCBI-GeneID:
40723983
NCBI-ProteinID:
XP_029741776
UniProt:
A0A4U7KY77
LinkDB
All DBs
Position
SGRAM_10:complement(join(85621..86033,86153..89627))
Genome browser
AA seq
1295 aa
AA seq
DB search
MSWQRLRISTVFNSTPSSFASFPLPAVFSPGVVSLRSLCTSTASLATPPPHRNMLADLRV
LHVPSSDTNVLPPVILQFGADRYLFNVGEGTSRSSTQRKANLSRVSNIFVSRVGWEAIGG
LPGVLMSMADGQRATESLHGPDGLRYALATMRTYAKRDIMKLVINEIPAHIGPSNTANKS
TASAETNTEPFFTDDNLAVHAVLLFPASAVKRASKKQKIGSPRPPAVSAASLEKVDQLWR
KPYFNPSTLEDEQARAWIHLISDSIFNDSLLRKRQQQSSAMAGNTKDASTSRQLVSSADD
VEMEDSDQVPASSSSSQARAHSPWRPPLSPAFVTRLLPRPGSDTRNVSAERSDPAEGGQA
PVLAFICEAHPQRGKFDPAKATEAGVSPGPSFAALTRGDDISFQRPVSWSSMPADERKRW
MQSRRGAQRGANANSKAKAKNSKDSAPPAAWSDLEQVTVKSTDVMGPSRAGAVVLHIYLP
SLDYIDDLLSDRVASAFSAYTSDANRHLNREQSRTPHAIVHAVPLDVLQHARYQDWMRRF
GPDCHHIVANHHVCANKLMFPSSATIHLRLSKLDGVMFKVPQYQLTPRVPVSSLAKAVSS
NATVAANDFPIKIVAAEADQVISLQPRGEPKHFESGAPDFNFAVQSEQADKLAAFEFDVV
EESQRQTEQLTKAKAKNKSSAKNGVVDVAVDAAADEVGAVRNVRLREARKQAWQVYLDVV
QKIKADSSTASATVPPRKDILVTTLGTGSAAPSKYRNVISTLIQTPSSGTILLDAGESTY
GLLRRKFGCRRDGTAAESGSSASQDVDDILREMRVLFISHIHADHHIGLIRLLLERRKLQ
PRPAKPLYLVGTGFVHNYLEEYDQIEKLGLDEDVVLVLNDHLDHATGVDPNPSSEASLNS
TLTNGNSRGLQQAHREHVAHVQAIKQATGLSHIHTARVVHRGSHCYGLVLRHTTEDWSVA
YSGDTRPAPELIAAGKDCKLLIHEATLEDGELEMAIGKGHSTFGEAIRVGHKMGAHNILL
THFSQRYPKMARSSLFALGEQADQGGKNVPIALAFDMVTYPLSQFSKIQGYTPAMEALFA
ADTEGEDEDQSVADDAKEAAPSSGKAKGNGKQGKKQANGSSANGLNATAAAAAGTVGIVA
TNEDTHPNAREAKAAKTDNKPSNTQPRPTTERYMRKGMKPSDWRYLGLRLSPSSSSSTSA
ALPTILATYVLELVQTAQTATMGAAGGAFNVDVLSVHASASGTGWDAVLRVEARHGQDLA
TCLSMLPSPRVQDAQLRLSIVGPTTAIQTVQNLLE
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggcaacgactccgcatctcgacggtattcaacagcacaccatccagttttgcc
tcgttcccgctgcctgcggtgttcagccctggagtagtctcgttgcgtagtctgtgtacg
tctaccgccagcttagccacgccgccacctcacaggaacatgctcgccgatcttcgcgtg
cttcacgtgccatcctccgacaccaatgtgctaccaccagtcatcctccaattcggcgct
gatcgctacctcttcaatgttggcgaaggcacatcccgctcctccacccagcgcaaagca
aatttgagccgtgtttccaacatctttgtttctcgtgtaggatgggaggccatcggtggt
ctgccaggcgtgctcatgtccatggccgatggacagcgggccaccgagtctctacacggc
cctgacggcctccgatatgcactcgccaccatgcgtacctatgcaaagcgcgacatcatg
aaacttgtcatcaacgagattcccgcacacattggcccttccaacaccgccaacaagtca
acggcgtctgcagaaacaaacacagaaccctttttcaccgatgataacctcgctgtccac
gctgtcttgctgtttcccgctagtgctgttaaacgagcatcgaaaaagcaaaagatcggc
agccctcgcccgccagccgtctcagcagcttccctagaaaaagtagatcaactgtggcga
aagccctacttcaacccttccactttggaagacgaacaagcacgagcttggatccacctc
atctccgacagcatattcaacgactcgcttcttcgtaagcgtcagcaacagtcgagcgcc
atggctgggaacactaaagacgcgagcacttcacggcaactcgtctcctcagccgatgac
gtcgagatggaagattccgaccaagtaccagcttcttcatcatcctcgcaagctcgagct
cactcaccctggcgccccccactttctcccgctttcgttacccgcctcctaccgcggcca
gggagcgacacccgcaacgtgtcggcggaacgttctgatccagccgaaggaggacaggct
cccgttctggctttcatctgcgaagctcacccacagcgaggcaagtttgaccctgccaaa
gctacggaggctggggtttccccaggcccctcatttgcggccctgacgaggggagatgat
atcagcttccaacgtcccgtgtcctggtccagcatgccagcagatgagagaaaaaggtgg
atgcagagccggagaggcgcccagcgtggtgcgaatgcgaacagcaaggcaaaggccaaa
aactccaaagactcggcaccgcccgctgcatggagcgatctcgagcaagtcactgtcaag
tctaccgatgttatgggcccttcgcgtgctggtgccgtcgtgttgcacatctacctgcca
tccctcgattacatcgacgatctgctcagcgaccgagtagcctctgccttctcagcctac
acttccgacgccaatcgtcatctcaacagagagcaatctcgcactccgcacgccatagtt
catgccgttccgctcgatgtccttcagcatgctcgctaccaagattggatgcgtcgattt
ggacctgactgccaccacatcgtggccaaccaccatgtctgcgccaacaagctcatgttt
ccttccagcgccaccattcatctccgtctctctaaactcgacggcgtcatgttcaaggtg
cctcagtatcagctcacaccccgagtgcccgtgtcttcactcgcaaaggcagtctcgagc
aacgcgaccgttgccgcgaatgacttcccaatcaagatcgtggcagcagaggcagatcag
gtcatctcgctccagccaagaggcgaaccgaagcattttgagtcgggcgctcccgacttc
aactttgccgttcagtcagaacaggccgacaagctggctgcgttcgagttcgacgttgtc
gaggagtcccagcgccaaacagagcagcttaccaaagccaaggcaaagaacaagagcagt
gccaagaatggtgtcgtcgacgttgccgtagacgcggcagctgacgaagtcggtgctgtg
cgcaacgttcgactccgtgaagcgcgcaagcaggcgtggcaggtctacctcgatgtggtc
caaaagatcaaggctgactcgtcgaccgcatcggctactgtccccccgaggaaagacatc
ctcgtgaccacgctaggcacaggttcggcagcgccgagcaagtaccgcaatgtcatttca
accttgatccaaacaccttcgtcaggcaccatcttgcttgacgctggagaatcgacatac
ggcctgcttcgccgcaagtttggatgtcgacgagacggcactgctgccgagagcggatcg
tcggcctcgcaggatgtcgacgacattctccgcgagatgcgcgtgctgttcatcagccac
attcatgccgatcaccacattggtctcatccgtctgctgctcgagcgacggaagcttcag
cctcgaccggccaagcccctctacctcgttggaacagggttcgtacacaattacctcgaa
gaatacgatcaaattgagaagctcggactggatgaagacgttgttctcgtcctcaacgac
cacctcgatcacgccaccggagtcgatccaaatccttccagtgaagcaagcctcaacagc
acattgaccaacggcaacagccgtggattacagcaagcacaccgcgagcacgttgcgcac
gtgcaagccatcaagcaggccaccggcctctctcacatccacacggcacgcgtggtgcac
cgcggctcgcactgttatggcctcgtcctccgacacaccacggaagactggtccgtggcc
tactctggcgatacacgtccagcacccgaactcatcgctgctggcaaagactgcaagttg
ctcatccacgaagccacactcgaagacggtgagctcgagatggcgatcggtaaggggcac
tcgacttttggagaagcgattcgagtcggacacaagatgggtgcgcacaacatcttgctg
acgcacttttcgcagcgctacccgaagatggcccgatcttcgctgtttgccttgggcgag
caggcggatcaaggtggcaaaaatgtgccgattgcactggcatttgacatggtcacgtat
ccgctgagtcaattcagcaagattcaagggtatacacctgcgatggaggcactgttcgcg
gccgacactgagggcgaagatgaagatcagtcggttgccgatgatgccaaggaggctgcg
ccaagctcgggcaaagccaagggcaacgggaagcaaggcaagaagcaggcgaatggcagc
agtgcaaacggtctgaatgcaacagcagcagctgccgcgggaacggtggggattgtggct
acaaacgaggatacacaccctaacgcaagggaagcgaaagctgcaaagacagacaacaag
ccatccaacactcaacctcgtcctacgaccgaacgatacatgcgcaaaggaatgaagccg
tccgattggcgctacctcggcctgcgactctctccctcgtcatcgtcttccacctctgca
gcgctaccgacgatcctggcgacgtatgtgctcgagctggtgcagacagcacaaacggcg
acgatgggtgcggccggcggagcgttcaatgtcgatgtcctatcggtgcatgccagtgcc
agcggaacgggttgggatgcagtgctgcgtgtggaagcgcgacacgggcaggacctggct
acgtgtctcagcatgcttccatcgccccgagtgcaagatgctcagctcaggttgagtatc
gttgggccaacgacagctatccagaccgtgcagaatctgctcgagtag
DBGET
integrated database retrieval system
