Sporisorium graminicola: EX895_001122
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Entry
EX895_001122 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
sgra
Sporisorium graminicola
Pathway
sgra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EX895_001122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgra03021
]
EX895_001122
Transcription machinery [BR:
sgra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
EX895_001122
Prokaryotic type
Archaeal type
TFE
EX895_001122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Motif
Other DBs
NCBI-GeneID:
40724017
NCBI-ProteinID:
XP_029741810
UniProt:
A0A4U7KY82
LinkDB
All DBs
Position
SGRAM_10:complement(172248..173600)
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AA seq
450 aa
AA seq
DB search
MSSITGLGRAGHDADVKLASEEQLSAIRRMAQIVARIFYEDRHIVLMDQLVSITVLPADV
LAHRLGIQVKELAALSSKLLEDKLICTFRRNEIRDTITNRSVPRTYYYLDFKLFLDVTKW
RMMSIRKKIDTRLRNELDNKGYVCPRCKMSYSTLEVAHLLDISRNVFVCETPGCNTELVD
NEEAEDVKRSKDSLMRFNEQLSTLLGGLRRTEGITLPPLDVGAWLAKHAASQPWFAARSE
DASSAPSVSTVNGAPALQVDLASNDPAAEAARRLAKQKAEDEQRKQNALPAWHLASTVSG
EQTALGRKQQHFQSSNGLDVDEGKDDEDGDDDDYYAQYASLQTAEAAAAAPSPSPTKASQ
AFSVDEEEFDDFEPVTQLSTEASTQRKRTRSASVASDADNKRAKPMASQENGHANGSTAA
TAATAATAADGARDGGDDDEDGMDDFEDVV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcatcaccggtctcggccgtgctggtcacgacgcggacgtcaaactcgccagc
gaagaacagctttcagccattcgcagaatggctcagatcgtcgcgcgtatcttttacgag
gatcgacacattgtccttatggatcaactcgtcagcatcactgtgcttcctgccgatgtc
cttgcgcatcgcctcggcatccaggtcaaggagctcgcggctctttcgtcaaagctgttg
gaggacaagctaatctgtaccttccgcaggaacgaaatcagagacaccatcacgaaccgt
agcgttccacgcacctactactatctcgacttcaagctcttcctcgatgtcacaaaatgg
cgcatgatgtcaatccgtaaaaagatcgatactcgtctgcgcaacgagctcgacaacaag
ggttacgtctgcccgcgctgcaaaatgtcctactccaccctcgaggtagcgcatttgctc
gacatctcccgcaacgtctttgtatgcgagactcccggctgcaacaccgagctcgttgac
aacgaagaggccgaggacgtcaagagaagcaaggacagcctgatgcgtttcaacgagcag
ctctccaccttgcttggaggtcttcgtcgcaccgaggggatcactttacctcctctcgat
gtgggtgcgtggcttgcaaagcacgctgcctctcagccatggttcgccgccaggtccgaa
gatgcctcttccgcgccctccgtgtcgaccgtcaacggcgcgccagctctgcaggtcgac
ctcgcttcgaacgatccggcagccgaggcggctcgccgattagccaagcagaaagccgaa
gacgaacaacgaaagcagaatgctctgccagcatggcatcttgccagtaccgtcagtggc
gagcagacggcgttgggtcgcaagcagcagcactttcaatcgtcgaatggccttgacgtt
gacgagggcaaagacgacgaggatggcgacgatgacgactactacgcgcaatacgccagc
ctgcagacagcagaggcagcagcagcagcgccatcaccgtcgccgacaaaagccagccaa
gcattctcagtggacgaggaagagtttgacgactttgagcccgtcactcagctatccacc
gaggcgagcacacagcgaaagcgaacacgatccgcgtcagtcgccagcgatgccgacaac
aagcgtgccaagccaatggcgtcgcaagagaacggacatgcgaacggaagcacggctgcg
acggctgcgacggcagcgacggcagcggacggcgctcgcgatggcggtgatgacgacgag
gatggcatggacgattttgaggatgtcgtgtag
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integrated database retrieval system