Sporisorium graminicola: EX895_001172
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Entry
EX895_001172 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
sgra
Sporisorium graminicola
Pathway
sgra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EX895_001172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgra03041
]
EX895_001172
Enzymes [BR:
sgra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EX895_001172
Spliceosome [BR:
sgra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
EX895_001172
Complex C
U5 SnRNP specific factors
EX895_001172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
ResIII
BRR2_plug
Helicase_C
Motif
Other DBs
NCBI-GeneID:
40724067
NCBI-ProteinID:
XP_029741860
UniProt:
A0A4U7KYC7
LinkDB
All DBs
Position
SGRAM_10:complement(326439..333095)
Genome browser
AA seq
2218 aa
AA seq
DB search
MPPKKPDLSGYQYSALSSLVINADRSHRRPDEPSGEAESLAGRINVRDMGSAVQSEGVKH
LDKKRKKAQSDDQLTQPNPKRQAASTSFSNQNSYTDILQATSELEGLRYHPKTAETRDIY
ELILSIVHSALGDQAQDVVRSAADTTLEILKDNDLKDLEKKNEIQEILGTLSTETFGQLT
NLSKKITDYDEPGPSDGAADVDAKIGEIDEQTGVAVLFDDDDEESDQDGVNYVVRDGSDD
SDASDNESAPRQRDLDADADAAADDDDGEDALMIGPSTTANTNADVDAKPRDPNHVSPRD
IDAFWIQRQISQHYPDAHEASDKADKAFDILSAESDVRDCENSLMELFDYDKFELVQVLT
KNRDAVVWCTRLARADDDEKVNVQVAIREKGVAWILKALQGDASLNVASANGKTSNGLTP
IDLEDAQRKAKRLTSRATIAPGSTAQPRRGVDLEAMAFAQGGHLNTNAKVRLPEGSFKRT
KKGYEEIHIPAPVKRTVGEGELVPITSLPLWAQEAFPGATSLNPVQSRCYPVAFGSDEPM
LLCAPTGAGKTNVAMLTILNEIGKWRDQETGEIDLNAFKIVYVAPMKALVSEQAANFRDR
LQSYGIVVNELTGDSQLTKAQIAETQIIVTTPEKWDVISRKSTDTSYTNLVRLLIVDEIH
LLHDDRGPVLEAIISRTIRRMEQMNDPVRLVGLSATLPNYQDVATFLRVNPKTGLFYFEA
NYRPCPLKQEYVGITEKKAIKRLLVMNEVTYEKTLDQAGKNQVLIFVHSRKETAKTAKFI
RDRAMEQDTLNRFLPPSPASQEVLRSELDNITDADLKDVMPYGFGIHHAGMSRLDRELVE
ALFADGHLQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWCEITPQDMLQMLGRAGR
PQFDTFGEGIIITNHSELQYYLSLLNQQLPIESQLVSKLADNLNAEIVLGTIRNRDEAVA
WLGYTYLYVRMLRSPTLYSVTADYADDDPFLEQKRADIVHTAAALLEKCGLLRYERRTGN
FTSNELGRIASHYYITHDSMLTYHQQIKPQLGLIELFRIFALSNEFRHQVVRQDEKLEVA
KLLERVPVPVKESADDPIAKVNVLLQSWISQLKLDGYVLAADMVYVTQSAGRILRAIFEI
CLKRGYARLSRMALDLCKMVESRQWGSMTPLRQFRGVPADLIRRLERKEYPWNRLRDLEP
NEIGELIGIPKAGRLVHRLVHQFPRLELQAFFQPLTRSLLRVQLTITPDFQWDEKVHGGA
QSFWIMVEDVDAEIVLFHDQFLLLRKYAEQEHTVDFTIPMTEPIPPNYYISVVSDRWLHS
EVRLPISFKNLILPEKFPPHTPLLELQPQPVTALNDDAAEELYSKAFPHFNKVQTQTFHA
LYGSDDSVFVGAPTSSGKTVCAELALLRLWKDEDAGRAVCIMPYESMVAPRVAEWKAKFG
SYQGGKEVLGLTGETSADLRLLEMADVVVCTPEHWDVLSRRWRQRKNVQSVALYVFDEIH
MVGDARIGPTYEIVASRARFVAAQTQNATRMVALSVPLANARDLGDWLGAPSGSVFNFAP
GARQVPMEVHFQTFNIPHFPSMMIAMAKPAYLAIIEHAEDQPVIAFVPSRKQAKLTAEDL
LAYVVADSDRDDGDSENGGESRFLNIEMEDLEPHLQRVQDRELRELLASGIAYYHEGLTK
NDRRIVERLFTADAIRVVVASKETAWSIPLTAHLVLIMSLQTYEGREHRYVDYALPDVLQ
MVGRCSVPNDEGTCRLVLLCQATRKDYFKKFLAEGLPIESRLTSYAQDFFNAEIVARTID
DKQAAVDILTWTLMYRRLQQNPQAYNCQGKSMQHIGDFLSELVETTLADLENSKCIAIED
EMDVSPLNLGMIASYYNVSYVTIDVFNMSLKDRTKLRGMLEIVSSAAEFEDVPIRQHEDV
VLQRIYDRLPLKLDRLDLVSPYHKVFVLLQAHFARLRLPVDLEADQRWILGRMLNLLSAC
VDVMSSNAFLNAVVAMELSQMVVQAVWERDSVLRQVPGFTAEVVERCRAKGVEDVYGLSD
LLADMGEAERDELLQMDKKQVAQVASFVNSFPYIELTYTVETPEDDRNASEPLSVRVHLE
TDSDDDGGEAGDAQLVAQSTFYPGRKLVQWWIVIGDPGTRNLLAIKKVTIRKSIDVSLEV
SLPQGTHDRLKVWLMCDSYVGADREVQMEPIVVAQGVDSDEDDDSDGDEDEADQSDAE
NT seq
6657 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctaaaaagccagatctatctggttaccagtactcggcactctcgtcgctcgtc
atcaatgcagaccgttcgcatcgtcgcccggacgagccatctggcgaggccgagtcgctc
gctggtcgcatcaatgttcgcgacatgggctcagcagttcagtccgaaggcgtcaaacat
ctcgacaagaagcgcaaaaaggcgcaatcagacgatcagctcactcaaccaaatcccaag
cgtcaggctgcttctacctccttttccaatcaaaactcgtacaccgacattcttcaagct
acctcggaactcgaaggcctccgctatcatcccaagacagcagagacgcgagacatctac
gaactcatcctgagtatcgttcactctgcccttggagatcaagcgcaagatgtcgttcgt
tcggccgctgataccaccctcgagattctcaaagataatgacctcaaggatttggaaaag
aagaacgagatccaagaaatcctcggcacactctccaccgagacctttggacaactcacc
aacctctccaaaaagatcacagactacgacgagccaggtccttccgacggggctgccgat
gtcgatgcaaagatcggcgagatcgacgagcagaccggcgtagcagttctctttgatgac
gatgacgaggagagcgaccaggatggcgttaactatgtcgtaagagatggcagtgacgat
tcggatgcttccgacaacgaatcggcaccacggcaaagagacctcgatgctgatgcagac
gctgctgctgatgacgacgacggtgaggatgcgctcatgattggacccagcactacagcc
aacaccaacgctgacgtcgacgccaagccacgcgatccgaatcatgttagtcctcgcgat
attgacgcgttctggatccagcgtcagatctcgcagcactatccagacgctcacgaggcc
agcgacaaggccgacaaagccttcgacattctatctgccgaatccgatgtccgcgactgc
gagaacagcctcatggagctttttgactatgacaagttcgagctagtccaggtccttacc
aagaacagggatgccgtcgtctggtgtacgcgcttggcacgcgcagatgacgatgaaaag
gtcaacgtgcaggtcgccattcgcgaaaaaggtgtcgcttggatcctcaaggcgttgcag
ggcgacgcctctctcaatgttgcttcagccaatggcaaaacctccaacggtctcactccc
atcgatctcgaagacgcgcagcgcaaagcaaaacgtctcacttcgcgtgccaccatcgct
cctgggtccacagctcagcctcgccgcggcgtcgaccttgaagccatggctttcgctcag
ggcggccatctcaacaccaatgccaaggttcgcttgccagagggaagcttcaagcgtacc
aagaagggctatgaggagattcacattcccgcccccgtcaagaggaccgtgggagagggt
gaactcgtgcccatcaccagcctgcctctatgggcacaagaggctttcccaggcgccaca
tcgctcaaccctgtccaatcgcggtgctatcccgttgctttcggctccgatgaacccatg
ctgctgtgtgcacctaccggcgctggcaagaccaatgtggccatgctcaccatcctcaac
gagatcggcaagtggcgagaccaagagactggagagatcgacctcaacgccttcaagatc
gtctatgtcgctcccatgaaggccctcgtctcggaacaagcagccaacttccgcgaccgt
ctccagtcgtacggcattgtcgtcaacgagcttaccggtgacagccagttgacaaaggca
cagatcgcggaaacacaaatcatcgtcaccaccccagaaaagtgggatgtcatcagccgc
aagagcaccgacacttcgtacaccaatctggtccgcctcctcatcgtcgacgagatccat
ctcttacacgacgaccgcggtcccgtcctggaagccatcatctcgcgaaccatccgtcgc
atggaacagatgaacgatcctgtccgtctcgtcggcctctcggccactttgcccaactac
caagacgtggccaccttcctccgcgtcaatcccaaaactgggctgttctactttgaagcc
aactaccgcccctgtcctctaaagcaagagtatgtcggcatcaccgagaagaaggccatc
aagcggttgctcgtcatgaacgaggtcacttacgaaaagaccctcgatcaagcaggcaag
aaccaggtgctcatctttgtccactcgcgcaaagagacggccaagaccgccaagttcatc
cgcgaccgagccatggagcaggacacactcaaccgcttcttgcccccttcgcccgccagc
caggaggtgctgcgctctgagcttgacaacatcaccgacgccgacctcaaggatgtcatg
ccctacggctttggtattcaccacgccggtatgtcgcgccttgaccgcgagttggtggaa
gcgctctttgccgacggtcaccttcaggtgctagtctccaccgccaccctggcttggggt
gtcaaccttccagcgcacaccgtcatcatcaagggcacgcaaatctacaatccagagaag
ggacggtggtgcgagatcacgccgcaagacatgctccagatgctcggccgtgccggtcga
ccgcagttcgacacatttggcgaaggcatcatcatcaccaaccactctgagctccagtac
tatttgagtttgctcaaccagcagctgcccatcgaatcgcagctcgtctccaagctcgcc
gacaatctcaacgccgagatagtcctaggcacgatccgcaaccgcgacgaggcggtcgct
tggctgggctatacctatctctacgttcgcatgctgcgctcgccgacactgtacagcgtc
acagctgactatgccgatgacgatccgttcctcgaacagaagcgcgccgacatcgtccac
accgccgccgccttgctcgaaaagtgcggcttgttgcggtacgagcgccgcacgggcaac
ttcacgtccaacgagctcggccgcattgcatcacattactacatcacgcacgacagcatg
ttgacctaccaccaacagatcaaaccgcagctcggcctcattgaactcttccgcatcttt
gcgctctccaacgagttccgccaccaggtggtgcgacaggatgagaagctcgaagtcgcc
aagctgctcgaacgcgtgcccgtccctgtcaaggagtcggccgacgacccaatcgccaag
gtcaacgtgcttttgcagtcgtggatctcgcagctcaagctcgatgggtatgtgcttgct
gccgacatggtgtatgttacgcagtcggcggggcgcatcctgcgtgccatctttgaaatt
tgcctcaagcgcggctatgctcggctcagcaggatggcgttggatctttgcaagatggtc
gagtcgcgtcagtggggctcgatgacaccgctacgtcaattccgtggtgtgcctgccgat
ctcattcgccgtctggagcgcaaggagtatccctggaaccgtttgcgcgacctcgagcca
aatgagatcggcgagcttatcgggattcccaaagcggggcgactcgtccataggttggtt
caccaatttccgcgtttggagctccaagccttcttccaaccactcacccgctccttgctt
cgcgtccagctcaccatcacccccgactttcagtgggacgaaaaggtccacggcggtgct
caatcgttctggatcatggtcgaagacgttgatgccgaaattgtgctcttccacgatcag
ttcctgctgctgcgcaagtacgcagaacaggagcacacggtcgatttcacaatcccaatg
accgagcccatcccgcccaactactacatcagcgtcgtcagcgatcgatggctgcacagc
gaagtgcggcttcccatctcgttcaagaatctcatcctgcccgaaaagttcccgcctcat
acgccgttgctcgagctgcagccacaacccgttactgcgctcaacgacgatgctgcggaa
gagctgtactccaaggcgttcccgcacttcaacaaggtgcagacgcagacattccacgca
ctctacggcagcgatgattccgttttcgtcggtgcaccaacgagtagcggcaagacggtc
tgcgccgagttggcactgctgcggctctggaaggacgaagatgcgggccgtgccgtctgc
atcatgccgtacgaatccatggtggcccctcgcgtggccgaatggaaggccaagttcggc
tcgtatcagggcggcaaggaggtgcttggcctgactggagagacgagtgccgacctacgt
ctgctcgagatggccgatgtcgttgtctgcacaccggaacactgggacgttctctcgcgc
cgctggcgtcagcgcaagaacgtgcaaagcgtcgccctgtacgtctttgacgaaatccac
atggtcggcgacgctcgcataggtcccacgtacgagatcgtcgcttcccgtgcgcgcttc
gttgctgcccagacgcaaaacgctacgcgcatggtggcgctcagtgtcccgctcgctaac
gcacgcgatctcggcgactggctcggtgcgcccagtggcagcgtgttcaactttgccccc
ggtgcaaggcaggttcctatggaggtgcacttccagacattcaacatcccgcacttcccc
agtatgatgatcgcgatggccaagccggcgtacttggcgatcatcgagcatgcagaggac
cagccggtgattgcgtttgtgcccagtaggaagcaggccaagctgactgccgaggatctg
ctcgcctacgtagtagctgacagcgacagggacgacggcgacagcgagaacggtggcgag
tcgaggttcctcaacattgaaatggaggatctggagccgcatctgcagcgcgtgcaggac
cgagagttgcgagagttgctcgccagcggtatcgcgtactatcacgaggggctcaccaag
aacgaccgccggatcgttgaacgtctgtttacggccgacgcgatccgtgtagtggtggcc
agcaaagagacggcatggagcatcccactcacggcgcacctcgtgctgatcatgtcgctg
cagacgtacgaagggcgcgaacaccgatacgtcgactatgcgctgccggacgtcttgcag
atggtggggcgttgcagtgtgcccaacgacgaggggacttgtcggctcgttctgctgtgc
caagcgacgcgcaaggactacttcaagaagttcctcgccgaaggcttgcccatcgagtcg
cgcctcacctcatatgcccaggactttttcaatgccgaaattgtcgcccgcaccatcgac
gacaagcaagctgccgtcgacatcctcacgtggacgctcatgtaccgccgcttgcaacaa
aacccgcaagcctacaactgccagggtaagagcatgcagcatatcggcgacttcctgtcg
gagctggtggagaccacgctagccgatctggagaactcgaagtgcattgcgatcgaggac
gagatggacgtttcgccgctcaatctgggcatgatcgcgagctactacaacgtgagctac
gtcacgatcgatgtgttcaacatgtcgctcaaggaccgcaccaagctgcgcggaatgctg
gagattgtcagctcagcggccgaattcgaggacgtccccatccgccaacacgaagacgtg
gtgctgcagcgcatctacgaccggctcccgctcaagctggatcggctcgatctggtgtcg
ccgtaccacaaggtatttgtgctgctgcaggcacactttgcgcggctgcggttacccgtc
gatctggaggcggatcagcgctggatcttgggtaggatgctgaacctgctctcggcgtgc
gtggacgtcatgtcgtcgaatgcgttcttgaacgcggtcgtggcgatggagctgagccag
atggtggtacaggcggtgtgggagcgcgacagtgtgttgaggcaggtgcccggctttacg
gccgaggtggtggagaggtgtagggcaaagggggtagaagatgtgtatgggctgtcggat
ttgcttgcggacatgggtgaggcggagcgggacgagttgctgcagatggacaagaagcag
gtggcgcaggtggcgagcttcgtcaattcgttcccctacatcgaactaacgtacaccgtg
gagacgccagaagacgatcgcaacgccagcgaaccgctcagcgtgcgcgtccatctcgaa
accgactcggacgacgacgggggcgaggcaggtgacgcgcagctcgtggcgcaaagcacc
ttctatccggggcgcaaactcgtacagtggtggattgtcatcggcgacccgggcacgagg
aacctgctggcgatcaagaaggtgacgatccgcaaatcgatcgatgtcagcctggaggtg
tcgctgccccagggcacgcacgatcggttgaaggtctggttgatgtgcgattcctacgtt
ggcgcggatcgcgaggtccagatggagcccatcgtcgttgctcagggtgtcgattctgac
gaggacgacgactcggacggagacgaggacgaggctgatcagagtgacgccgagtag
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integrated database retrieval system
