Sporisorium graminicola: EX895_001272
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Entry
EX895_001272 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
sgra
Sporisorium graminicola
Pathway
sgra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EX895_001272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_001272
03041 Spliceosome [BR:
sgra03041
]
EX895_001272
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
EX895_001272
Spliceosome [BR:
sgra03041
]
Complex B
Other components
Prp19-related factors
EX895_001272
Complex C
EX895_001272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_19
Suf
TPR_15
Mad3_BUB1_I
Unstab_antitox
TPR_16
Motif
Other DBs
NCBI-GeneID:
40724167
NCBI-ProteinID:
XP_029741959
LinkDB
All DBs
Position
SGRAM_10:complement(617948..621196)
Genome browser
AA seq
1082 aa
AA seq
DB search
MSPKKRSAPAAVAASPEVADEPTTSTPVQDAMGALESFFPITSPFPDPATDDTLIPAADV
MLEQELLRNPDNFRSWTSYIDHIVDTNVVKRPPPDASLSAFQASLLGPLASSTQRVALRR
ITSIYERALAQFPTRYSLWRDYLQNRSRFVLGEPKGGFEAKRKRDLQAAREKLDFGPTLI
DSPDDEDFGATYKGGLDGTVGWQEWKSLAALYERALMWLPTMPRLWLGYLSMFIHPQCPP
TLSYTHARRTFDRALRTLPGSLHLRIWKIYLKWAERRGGETCLRVWRRYLRVDPSLTERY
VSILLAQKHDQEEDEEEAEGEQDEVEQEGASSQPQRKAAGSKALEASKLLLGLARGAMDG
SYVSPEGKSPYQLFIEWLELTEKYPEEIGLDPEEEKQVLLIAAGTAANGRASGHQSTKRD
QGKATAAASREQAKGSSSKQSETDPLDPTRLNVTSIIQNDGLDKFTDQSGRLWTGLATYW
IKRGEFEVARDTFEAGMKAVKTVRDFTQIFDAYAETSENVIAFMMDELAEDADEEDEEQT
KEQKEAELDRRMQEFEELMERRPFLVNDVLLRRNPDDVQEWEKRVVLYGDNDEKIIQTYR
EAIQKINPRKATANFHQMFLNFAQFYEYGGSAGLAKLSTDGDGRDDIEQEREAAEGDLES
ARKIFEKAVTIPFRRVDDLAEIWCEWAEMELRHSNYDEAIRTMARSVAPPRNTKGIQYHD
DSLPPQTRLFKSLKLWSFYVDLEESLGDVESTKRVYEKMLELKIANAQIIINYAAFLEDN
KYFEESFKVYERGVELFTYPVAFEIWNVYLSKFVKRYGGAKLERARDLFEQALDKCPARF
CKPLMLMYGQLEEEHGLAKRAMKIYDRATRAVATDDRFDMFVFYLAKAAANFGLAATRPI
YERAIEALPDRQTADMCLRFAELERKLGEIDRARAIYAHASQFCDPRTQTEFWKQWNQFE
IETGSEDTFREMLRIKRSVQAQFNTDVSYIAASALASAQRSQAQSAGGESGRSNGVDKDA
NDPMAKVEAASKPAGARQTAFVAASTAASGARATDAAANEGGNEHKNDEVVGGDDQDDDD
LL
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccaaagaagcgatccgcaccggcggcggttgctgcgtcgcctgaagtggcggac
gaaccaacaacgtctactccagtgcaggatgccatgggagccctggaatcattctttccc
atcacatcgcccttccccgacccagcgaccgacgacacgctcatacccgcagccgacgtg
atgctcgagcaagagctccttcgcaacccagataactttcgttcgtggacttcttacatc
gaccacatcgtcgacaccaacgtggtcaagcgaccacctccagatgcttcgctcagtgca
tttcaagcttccctcctcggtccactggcaagcagcacacagcgggtagcattgcggcgc
atcactagcatctacgaacgcgcacttgcccagttccccacacgctactctctctggcgc
gactatctacaaaatcgctctcgctttgtacttggagagccaaaaggcggcttcgaagcc
aagcgcaaacgtgatctgcaggctgcccgcgaaaagctcgatttcggacccacactgatc
gattcgccagatgacgaggatttcggcgcaacctacaagggtggcctcgacggcaccgtc
ggctggcaagagtggaagagcttggcagcactttacgagcgcgcgcttatgtggctcccc
accatgccacgtctgtggctcggctatctgtccatgttcattcatccacagtgcccgccc
acgctttcgtatacgcatgcgcgacgcacctttgatcgtgcgctacgaaccttgcctgga
tctttgcatctcaggatatggaagatctacctcaagtgggcagagcgtcgaggcggagaa
acatgtctaagggtctggagacgctaccttcgagtcgacccgtcgctcacagagcggtac
gtgtcgattcttcttgcgcaaaagcatgaccaagaagaggacgaggaggaggcagaagga
gagcaagacgaggtggagcaggagggtgcgtcgtctcagccacagcgtaaagcagctggc
tccaaagctcttgaagcgtcaaagcttctcctcgggcttgcccgaggcgccatggacgga
tcctacgtcagtccagaaggcaaaagcccataccagctcttcatcgaatggctcgaactc
accgaaaagtatccagaggagatcggtttggacccggaagaagagaagcaggtcttgctg
attgcagcaggaacggcagcaaacggcagggcaagcggccaccaatccacgaaacgcgat
caggggaaagcgactgcagctgcatctcgggaacaggcaaagggctcgtcatccaagcaa
tccgagaccgatcctcttgaccccactcgcctcaacgtcacatccatcatccagaacgat
ggactggacaagttcacagaccagtccggaaggctttggaccggcttggcgacgtactgg
atcaagcgaggcgagttcgaggtggcacgcgatactttcgaggctggaatgaaggcagtc
aagacagtccgagactttacgcagatctttgacgcctacgctgaaacgagcgaaaatgtg
attgcgttcatgatggacgagctggccgaagacgcggacgaagaggacgaagaacagaca
aaggagcaaaaggaagccgagctcgatcgccggatgcaagaatttgaggagctcatggag
cgtcggccttttctggtcaacgacgtgctgctgcgacgcaacccggacgatgtgcaggaa
tgggaaaagcgcgtggtgctgtacggtgacaacgacgaaaagatcattcagacgtaccgc
gaggcgatccagaagatcaacccacgcaaagccacggccaacttccatcagatgttcctc
aactttgcccagttttacgagtacggaggatcggcagggctggccaagctgtctacggat
ggcgatgggcgcgatgacatagagcaggaacgggaggcagcagagggggatctcgagtcg
gcgcgcaagatctttgaaaaggcggtcacgattccgttccgtcgagtcgacgatctggcc
gagatctggtgcgagtgggctgagatggagttgaggcattccaactacgacgaagcgatt
cgcaccatggcgcgcagtgtggccccgcctcgcaacaccaagggcatccaatatcacgac
gactcgctgccaccacagactcgactattcaagtcgctcaagctgtggagcttctacgta
gacctggaagagtcgctgggagacgtagagagcaccaagcgtgtctacgaaaagatgctc
gagctcaagattgccaacgcacagatcatcatcaactatgcggcgtttctggaggacaac
aagtatttcgaagagagcttcaaggtgtacgaacgcggtgtcgaactgttcacgtatcca
gtggcgtttgagatttggaacgtgtacctcagcaagttcgtcaagcggtacggcggtgcc
aagctggaacgtgctcgcgatctgttcgagcaggcattggacaagtgccctgcgcggttc
tgcaagccgctcatgctcatgtatgggcaactcgaagaagagcacggactggccaagcgg
gcgatgaagatctacgaccgagctactcgagccgtggcgaccgacgaccgcttcgatatg
tttgtgttctacctggccaaagctgcggccaactttgggctcgcagcgacgaggcccatc
tacgaacgggcgatcgaggcgctgccggatcgacagacggccgacatgtgcctgcgcttc
gccgaattggaacgtaagctgggcgagatcgaccgggcgcgcgccatttatgcgcacgcg
tcgcagttctgcgatccacgcacacagaccgagttctggaagcagtggaaccagtttgag
atcgagacaggctcggaggatacgttccgcgagatgctgcggatcaagcggtcggtgcag
gcgcagttcaacacagatgtgtcgtacattgccgcgtcggcgctcgcctctgcgcaacgc
agtcaggctcaatcagccggcggcgagtccggccgtagcaatggcgtcgacaaggatgca
aacgatccgatggccaaagtggaagcggcatcgaaaccggcgggagcgcgtcagacggcg
tttgttgctgccagtactgcagccagtggagctcgcgctaccgacgcagccgccaacgaa
ggtggaaatgagcacaagaacgatgaagtggtcggtggtgacgaccaagacgacgacgat
ctgctctag
DBGET
integrated database retrieval system
