Sporisorium graminicola: EX895_001398
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Entry
EX895_001398 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
sgra
Sporisorium graminicola
Pathway
sgra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EX895_001398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_001398
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EX895_001398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
40724293
NCBI-ProteinID:
XP_029741598
UniProt:
A0A4U7KY23
LinkDB
All DBs
Position
SGRAM_11:281228..285736
Genome browser
AA seq
1502 aa
AA seq
DB search
MDVDRKPEAPAQHAPAPPQSPSTTIQPLISFSTIDAPSQRFYAVSIAVTVQAWKYSNILR
GLFSSTSSTSPSSTISQAFPTAPSLSTALFLNFAVLFVLSRLGIPLLDPRIASTKAAPSS
GNAQPQKPVLQPAKTVGLTYAHYLVLFLALSITDATLVGSAATNPFILALNGLLSLLQLA
ASTLGLSVPSAGIFPDVLSRQLSINEGHVRIRDLIQPKSHILGQHTIHILPHSTAKLLPS
SACYCVGPETPQVTIPVLFSNAHPDLLQYSITDFATGHVSYFNVSVDHLIPFGAPHSDRE
VDELSALNAASRSRDSKHGSLQADLLDDEDALDDRASLLRGVSYAERARIRAERRAQSLT
KRSASLDTPKSKRVPSTRSNHQLLWHLPVTQPGRVRLERVLDKSRNDARISTAEALVVQC
PSTKLIAAASMAAAGLTELLQTQHKCPGDRADFAAQVSGVAPLELEYRRIFAPLPSLDGS
GRHRDSSRQDNKRKISRISPPHHTSPLLLPEAEALLSPTERLALARERTRAASRRNKAGH
EDFSWAVSVDVDMPLSSIDFDHPGNYTYALESVTDACGNRVAVHADHPSGLSLAQKARKK
IKGSGDMSSSTYQQSVVVHARRSVTFDLRQCRPGHPLKLLRNVKGMNLTMQSSPDAEQSG
DWNVNVSFQPDNSAAGKGLWAPTAGKPATMQLALPSHSSRVPFTIEKPGTYRIDDIAGRY
CSGEVGSPWTCEVVDVPPPTAQINLSSIDDRCAGPVGVKAMSVLTGSPPFQLEYEVTKQG
RHPERKVRTIFDQTRDELDFRPDVDGAVTYKFVKLHDSNYRDISLDGPSFTQVFHPLSSA
EFTAPIRAHDDRAVMQSCSGKQAQADVRFSGAGPWDLTYAVRAGDSVETKVVQGITQSPH
QLKIDIPKSVAASGGLVTVSLVKIRDARGCEKSLATRDLNVEVRRVQPNVGFLPVKADKG
RHLEVLAGKAARLPIRLSGQGPWHVDYSWRADETAKEVDLSALLHNVDGELLAEHPGLYR
IKQIRDNYCPGTVLQDQEDFRISVRPQPHVQFAPDAGVPARNGSLVRTPVCRGQPDSVDI
VMSGQFPLDVEYEHVAPSWSASAEPEAAAPLASAAHEVALHGKRRKTAFTSALSTTNLEL
STALPGWHIYIIDSVGDAVYAPTRLQGFSAESPRRLEQMVLALPGASFGSAPSKHRRPSL
CVGDGLDQLSSLPTLKLQGQAPFTVTFEVVSTSNIASYRFTRTGIKTHEYKLELSADEFA
FSSKGVWTIRVLQVTDANQCQSAFTPEIKRGVQDDKTMTIEVAETADIASVSTREDYCIG
EMVEFALQGSPPWTVSYEFNGKSAQAAVTTPEFSRVAEKPGVLTIKSVAHQQNQCRRDLD
ARVSQEMVKTIHDLPTVRISEGNHFVEDLREGNKAEIIFNFKGVPPFAFTYQRSEPVDTH
ARPKVLETNTVSGILEEKYSIWAAVEGTWSVTWLQDRWCQVSLDYQSGAATPLGKSRLAI
KN
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgaccgcaaaccggaggcgcctgcgcagcatgctcctgcaccaccgcagtcg
ccatccaccaccatccagcccttgatctccttctccaccatcgacgcgccatctcagcgc
ttctacgcagtcagcatcgcagtgacagtccaagcgtggaagtattccaacatacttcgc
ggtctgttctcctctacctcgtccacatcaccatcgtctacaatatcgcaggcatttccc
accgctccctctctttcgacagcactctttctcaactttgctgtgctctttgtgctctct
cgtctcggaatcccgttgctcgacccacgcattgcttcaacaaaggcggcaccatctagc
ggcaatgcccaaccgcagaagccagtgttgcagccagctaagaccgtcggtctcacctac
gcccactacttggttctcttccttgccctctccatcacagatgcgactcttgtggggtcg
gcagccacgaatccgttcatcctcgcgcttaacggcttgttgagccttcttcagcttgct
gcttcgactctcggactcagtgtcccctccgctggcatcttcccagacgtgctcagtcgt
caactctccatcaacgaaggccacgttcgcattcgagaccttatccagccaaaaagccac
atccttggccagcacactatccacattcttccacatagcactgcaaagcttcttccttcc
agcgcctgctactgtgttggcccagagacacctcaagttaccatccctgtcctcttcagc
aacgcccacccggatctgctccagtactcgatcaccgactttgctaccggccacgtcagt
tacttcaacgtcagcgtcgaccatctaatccccttcggtgctcctcacagcgaccgagaa
gtcgacgagctcagcgcgctcaatgctgcctcgaggtcacgggactccaagcacggcagc
cttcaagccgatctgctcgacgacgaggatgccctcgatgaccgcgcctccttgctcaga
ggtgtctcgtatgcagaaagggcccgcatccgtgccgaacgccgtgcacagtcgctcacc
aagcgttctgccagtctcgacacacccaaatcgaaacgagttccctctacccgcagcaat
catcagctgctttggcatctacccgtcactcagcccggccgagttcgtctcgagcgcgta
ctcgacaaatctcgcaatgacgcccgcatctctaccgctgaagctctggtcgtgcagtgt
ccatccaccaagctcatcgctgccgcctccatggctgctgctggcttgacagaactgctt
cagacgcagcacaagtgccccggagatcgtgccgactttgccgctcaagtcagcggtgtg
gctccgcttgaactcgaataccgacgcatctttgctcctcttccctcactcgacggaagt
ggtcgtcacagggactcgtcgcgccaggacaacaaacgaaagatctcgcgtatctcgccg
ccgcaccacacttcgcctctcctcttgccagaagcagaagcgctcctctcgccaaccgaa
cgattggccctcgcacgtgagcgaacgcgtgctgcttcacgacgcaacaaggcgggtcac
gaagacttttcctgggccgtttcggtcgacgtcgacatgcccctcagcagcatcgatttt
gaccatccgggcaattatacatatgcgctcgaaagcgtcactgatgcgtgtggcaaccgg
gtcgctgtccatgccgatcacccatcaggcctttcgctcgctcaaaaggcgcgcaagaaa
atcaagggtagcggcgacatgtcctcgtccacctatcagcagagcgtcgtcgtccatgcc
cgtcgcagcgtcacgtttgatctcaggcaatgtcgacctgggcaccctctcaaactcttg
agaaacgttaagggtatgaatctcaccatgcaatccagcccagatgctgagcagagcggt
gattggaacgtcaatgtttctttccagccggacaacagtgccgcgggcaagggattgtgg
gcgcctacagccggcaaaccagccacaatgcagctcgccttgccttcccacagctctcga
gtgcccttcaccatcgaaaaaccgggcacgtaccgcatagacgacatcgccggacgctac
tgctctggagaggtcggctcaccctggacgtgcgaagtggtcgacgtgccgcctcccacc
gcccaaatcaacttaagcagcatcgatgatcgttgtgccggcccggtcggtgtgaaagct
atgtcggtgctcacaggcagtccgcctttccagctcgagtacgaagtgaccaagcagggc
cgtcatcctgagcgcaaggtccgcaccatctttgaccagacccgtgacgagctcgacttc
cgaccggacgtcgatggcgccgtgacgtacaagttcgtcaagctgcatgacagcaactat
cgtgacatttcgcttgacggaccctcgttcacccaagtcttccacccgctctcgagtgcc
gagtttactgcaccaatccgggcccacgacgaccgcgccgtgatgcagagctgcagcggc
aaacaggcgcaagccgatgtgcgattcagtggcgctggaccgtgggacctcacctatgcc
gtgcgtgcgggtgacagtgtcgagaccaaagtggtccaaggcatcacgcagtcgcctcac
cagcttaagattgatattcccaagtcggttgccgcttcgggcggtctggtgactgtcagt
ctggtcaagatacgcgatgcgaggggatgcgaaaagtcgctcgctactcgcgacctcaac
gtcgaggttcgacgcgtgcaaccaaacgtaggcttcctgcccgtcaaagcggacaagggc
cgtcatctggaggtgttggccggtaaagcggcccgtcttcccatccgactcagcggacaa
ggtccgtggcatgtggactactcgtggagagccgacgagactgccaaggaggtcgatctc
agcgccttgctgcacaatgtcgatggggagttgctggccgaacatcccggtctgtacagg
atcaagcaaatccgcgacaactactgcccaggtaccgtgctgcaagaccaggaagacttc
cggatcagtgtgcgacctcagccgcatgtgcaattcgccccggatgctggcgtgcccgca
cgcaatggtagcctggtgcgtacccccgtctgccgcggccagccggactcggttgacatt
gtcatgtccggccagttcccgctcgatgttgaatacgagcatgtcgcaccatcgtggagc
gccagcgccgagcctgaagcggcggcaccgctcgcatcggctgcacatgaagtggcgctg
cacggcaaacgtcgcaagaccgccttcacatccgcactgagcaccaccaacttggagctc
tcgacggctcttcccggctggcatatctacatcatcgattctgtcggtgacgcggtctat
gcaccaacgcgcttgcagggcttctcagccgaatcgcccagacgactggagcagatggtc
ctggcgctgcctggcgcatcgtttggcagtgcaccgtccaagcaccgccgaccttcgctg
tgtgtcggcgacggactcgatcaattgagcagcttgccgacgctcaagttgcagggtcag
gcccctttcacggtgacgtttgaggtggtgtcgacgtcgaatatagcatcgtaccgtttc
actcggactggcatcaagacacacgaatacaagctcgagctgagcgcggacgaattcgcg
ttcagcagcaaaggtgtctggaccatccgcgtgcttcaggtaacggatgccaaccagtgc
caatccgcgttcacgccggaaatcaagcgaggggtgcaggacgacaagaccatgacgatc
gaagtagccgagacggcggatatcgcaagcgtgtcgacgcgagaagactattgcatcggc
gagatggtcgaattcgcgctgcaaggtagtccgccctggacggtctcatacgagttcaac
ggcaaatcagcgcaggcagctgtgaccactccggagttttcgcgtgtcgctgaaaagccc
ggtgtgttgacgatcaagagcgtcgcgcaccagcagaaccagtgtcgacgcgatctcgac
gcgcgtgtttcacaggagatggtcaagacgatccacgaccttccgacggtacgcatctcg
gagggcaaccatttcgtcgaggatctgagagagggcaacaaggccgagatcatcttcaac
ttcaaaggtgtgccgccgtttgcattcacgtaccagaggagcgagccggtggacacgcac
gctaggccgaaagtgttggagacgaacacggtaagcgggatcttggaggagaagtacagt
atctgggcggctgtagaggggacgtggagcgtgacgtggctgcaggatcggtggtgtcaa
gtatcgctggattatcagagtggcgcagcgacaccattgggcaagtcgagattggcgatc
aaaaattag
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