Sporisorium graminicola: EX895_001506
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Entry
EX895_001506 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sgra
Sporisorium graminicola
Pathway
sgra03022
Basal transcription factors
sgra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EX895_001506
09124 Replication and repair
03420 Nucleotide excision repair
EX895_001506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgra03021
]
EX895_001506
03400 DNA repair and recombination proteins [BR:
sgra03400
]
EX895_001506
Enzymes [BR:
sgra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EX895_001506
Transcription machinery [BR:
sgra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EX895_001506
DNA repair and recombination proteins [BR:
sgra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EX895_001506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_34
Motif
Other DBs
NCBI-GeneID:
40724401
NCBI-ProteinID:
XP_029741706
LinkDB
All DBs
Position
SGRAM_11:589319..590794
Genome browser
AA seq
491 aa
AA seq
DB search
MFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLCTSSVSVMQWRQQFLQWSNIQD
NQISVFTADQKEKFSGASGIVVSTYSMVANTGKRSHTSQKMMNFLESREWGFILLDEVHV
VPASMFRRVLTKIKAHSKLGLTATLVREDEKIDELNFLVGPKLYEANWMDLAAKGHIATV
QCAEVWCPMTPEFYREYLCEKSRKKMLLYCMNPNKFQACQFLIDYHENRGDKIIVFSDNV
YALEAYAFKLKKPFIHGGTAHVERMRILQNFQHNSMVNTIFLSKVGDTSIDLPEATCLIQ
ISSHFGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTAEMFYSTKRQQFLIDQGYA
FRVITHLVGMQDMPGLVYKSQAEQIELLQSVLIANESDADLGSDLGGGWGGGGGGGGGGG
GGAGGSGSGLNGSSVAKASRTTGSLNSLSGAQHMSYIERNRSVNKSLNKDQGRHKLFQKR
ADKAKRKNMDD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtaacggccgtgcccgtagcggtatcattgtgcttccttgcggtgctggcaag
acgctcgtcggcatcacggctgcctgcaccatcaagaagagctgcctggtgctgtgtacc
agcagtgtaagcgtcatgcagtggcggcagcagttcctgcagtggagcaacatccaagac
aaccagatcagcgtgttcaccgcagaccagaaggaaaagttctcgggcgcatccggaatc
gtcgtgtctacctactcgatggtggccaacactggcaagcggtcgcacacgtcacaaaag
atgatgaacttcctcgagagtcgcgagtggggcttcattttgctggacgaggtgcacgtc
gtgccggcgagcatgttccgacgtgtcttgaccaaaatcaaggcgcactctaagttgggc
ttgacggcgacgctggtgcgtgaggacgaaaagatcgacgagctcaactttctcgtgggg
cccaagctgtacgaggccaattggatggatctcgctgccaaaggtcacattgctacggtg
cagtgtgccgaggtgtggtgtcccatgacgcccgagttctaccgcgagtatctgtgcgag
aagagccgcaaaaagatgctgctctactgcatgaatccgaacaagtttcaggcgtgtcag
ttcctcatcgactatcacgagaaccggggcgacaagatcatcgtgttctccgacaacgtg
tacgcgctcgaagcgtacgcattcaagctcaagaagccctttattcacggcggcacggcg
cacgtggagcgcatgcgcatcttgcagaactttcagcacaattcgatggtcaacaccatc
ttcctctccaaggtaggcgacacttcaatcgacctacccgaggcgacgtgcctgatccag
atctcgtcgcacttcggctcgcgaaggcaagaggcgcagcgactgggacgtatcttgcga
gccaagcgcaggaacgacgaagggttcaacgcgttcttctacagcttggtcagcaaggat
actgccgagatgttttactcgaccaagaggcagcagttcctcatcgaccagggatacgcg
tttagggtgattacgcatctggttggaatgcaggacatgccagggctggtgtataagagc
caggcggagcagatcgagctgctgcagagcgtgctcatcgccaacgagtcggacgccgac
ctgggctcggatctcggaggaggttggggaggaggtggtggcggtggtggtggcggtggc
ggtggagcgggaggctcagggtcgggcttgaacggcagctctgtggccaaggcatcgagg
acgacaggctctctcaattcgctgagtggtgcgcagcacatgtcgtacatcgaacgcaat
cgttcggtcaacaagtcactcaacaaggatcaaggacgtcacaagctgttccagaaacgt
gccgacaaagcaaaacgcaaaaacatggacgactga
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