Sporisorium graminicola: EX895_001517
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Entry
EX895_001517 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_001517
03041 Spliceosome [BR:
sgra03041
]
EX895_001517
03036 Chromosome and associated proteins [BR:
sgra03036
]
EX895_001517
Enzymes [BR:
sgra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EX895_001517
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
EX895_001517
mRNA cycle factors
Common to processing body (P body) and stress granule
EX895_001517
Spliceosome [BR:
sgra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EX895_001517
Chromosome and associated proteins [BR:
sgra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
EX895_001517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Utp25_C
ResIII
Cas3-like_C_2
DUF7090
Motif
Other DBs
NCBI-GeneID:
40724412
NCBI-ProteinID:
XP_029741717
UniProt:
A0A4U7L316
LinkDB
All DBs
Position
SGRAM_11:623548..625566
Genome browser
AA seq
672 aa
AA seq
DB search
MTYENNTHQQNGAGAAGIESRFANMSVQNGAAGGAPRKAYVPPHLRGQPQSEQAASLNSS
AATFSPRAPAAFNSNGHDNGPPAAPAAFSSFNRGGPRGGAGGWDTPSSGGGYGGARAGGG
GYGAGPRSDGFGQWKDGQHVPGPHNARLQKELFGEAGDGLHQSTGINFDKYGDIPVEASG
RDVPDPVTEFTSPPVDAHLLENIKLARYTHPTPVQKYSIPIVELGRDLMGCAQTGSGKTG
GFLFPILSALFTHGPPPPSPEMAQGGYGRRKAFPSTLILAPTRELVSQIYDEARKFTYRS
WVKPAVVYGGADIGSQLRQIERGCDLLAATPGRLVDLMERGRISLSNVRFLVLDEADRML
DMGFEPQIRRIVEGEDMPGVMDRQTLMFSATFPRDIQLLAKDFLKEYVFLSVGRVGSTSE
NITQKIEYVEDDDKRSVLLDVLASMPSGGLTLIFVETKRMADMLSDFLLRSNIAATSIHG
DRTQRERERALELFRSGKTPIMVATAVAARGLDIPNVTHVVNYDLPSDVDDYVHRIGRTG
RAGNTGHATAFFNRGNKNIVRDLLDLLKEANQEVPQWLEAVARESMFGASGGGGRGGRGR
GRGRGGASSFGSRDARSVNGPSSGAGRGFGGGYGGGMGGGYGGGIGGAAAYGGPPPASNG
GSYGGNSGGSWW
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgacttacgaaaacaacacacatcagcagaacggtgctggcgccgccggaattgagtcc
aggttcgccaacatgtctgtccagaacggcgccgctggcggtgctcctcgcaaggcctac
gtcccacctcaccttcgtggccagccgcagtcggagcaggccgcttcgctcaactcttcc
gctgctacgttcagccctcgtgctcctgccgccttcaacagcaacggccacgacaatggc
ccccctgccgctcctgccgccttcagcagcttcaaccgtggcggccctcgtggcggcgcc
ggtggttgggataccccttcctctggtggcggctacggtggtgcccgcgcgggcggtggt
ggctacggcgccggcccccgcagcgacggcttcggtcagtggaaggacggccagcacgtt
cccggcccgcacaacgctcgtctgcagaaggagctctttggcgaggccggcgacggtctc
caccagagcaccggtatcaactttgacaagtacggtgacattcccgtcgaggccagcggc
cgtgacgttccggaccctgtcactgagttcacgtcgcctcctgtcgatgcccacctgctc
gagaacatcaagcttgcccgctacacccaccccacccccgttcagaagtactcgatcccc
atcgttgaactcggccgtgacttgatgggctgtgcccagactggttccggtaagacgggt
ggtttcttgttccccatcctgtcggccctcttcactcacggtcctcctcccccctcgccc
gagatggcccagggtgggtacggccgcagaaaggcgttccccagcacgctcatcctggct
cctactcgtgagcttgtctcgcagatttacgacgaggctcgcaagttcacctaccgatct
tgggtcaagcctgccgtcgtctacggtggtgccgacattggctctcagctccgccagatc
gagcgcggttgcgatcttctcgccgctacccccggtcgtctcgtcgacctgatggagcgt
ggccgcatcagcctcagcaacgtccgcttcctcgtactcgacgaggccgaccgcatgctc
gacatgggtttcgagccccagatccgtcgcatcgtcgagggtgaggacatgcctggcgtc
atggaccgccagacgctcatgttctctgccaccttccctcgcgacatccagctgctcgcc
aaggacttcctcaaggagtacgtcttcctttccgtcggccgtgtcggttccacttcggag
aacatcacacagaagatcgaatatgtcgaggacgacgacaagcgctcggtgctgctcgac
gtgctcgcctcgatgcccagcggcggtctcacgctcatcttcgtcgagactaagcgcatg
gccgacatgctcagcgacttcctcctccgctccaacattgccgccacctcgatccacggc
gaccgaacgcagcgcgagcgcgagcgtgcccttgagctcttccgatcgggcaagacgccc
atcatggtggctactgccgtcgcagctcgtggtctcgatatccctaacgtcacccacgtt
gtcaactacgaccttccctcggacgtcgacgactacgtccaccgcatcggtcgtaccggc
cgtgccggtaacaccggccacgccaccgccttcttcaaccgaggcaacaagaacattgtg
cgcgacctgctcgacctgctcaaggaggccaaccaggaggtgccccagtggctcgaggcc
gtggcccgcgagagcatgttcggcgcgagcggtggtggaggacgtggcggtcgtggtcgc
ggtcgcggccgtggcggtgcctcgtcgttcggcagccgtgacgctcgtagcgttaacgga
ccctcgtctggcgccggtcgtggcttcggcggcggctacggtggcggtatgggcggtggc
tacggtggtggcattggcggtgctgctgcctacggcggtcctccccctgcttccaacggc
ggcagctacggcggcaactcaggaggatcgtggtggtaa
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