Sporisorium graminicola: EX895_001601
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Entry
EX895_001601 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sgra
Sporisorium graminicola
Pathway
sgra03022
Basal transcription factors
sgra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EX895_001601
09124 Replication and repair
03420 Nucleotide excision repair
EX895_001601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgra03021
]
EX895_001601
03036 Chromosome and associated proteins [BR:
sgra03036
]
EX895_001601
03400 DNA repair and recombination proteins [BR:
sgra03400
]
EX895_001601
Enzymes [BR:
sgra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EX895_001601
Transcription machinery [BR:
sgra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EX895_001601
Chromosome and associated proteins [BR:
sgra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EX895_001601
DNA repair and recombination proteins [BR:
sgra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EX895_001601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
PspAA
nSTAND3
DUF4932
SMAP
YtxC
Motif
Other DBs
NCBI-GeneID:
40724496
NCBI-ProteinID:
XP_029741055
LinkDB
All DBs
Position
SGRAM_12:160586..163129
Genome browser
AA seq
847 aa
AA seq
DB search
MKFYIDELPVLFPYPKIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQ
LFHPAKRKLIYCSRTVPEIEKALAELKRLMEYRARYNVKEGEESEVIKNEAEGSNGPGEH
NTEMKGKGKAGGQMEDILALGLSSRKNLCIHPDVSRERKGKVVDARCRDMTSSWACEKGR
QDPGSVELCDFHEELGKMEPGQLIPQGVWTLEEVKEYARDKGICPYFAIRRMLPFVDIII
YSFHYLLDPKIAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAYRSINHL
SERVDEIKKTDASKLQDEYARLVEGLQEQGEQREAESFMANPVLPDDLLQEAIPGNIRRA
EHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDITYIERKPLRFCAERLRMLVSTL
ELTRLDEFSALQKVAAFATLVATYDKGFLLILEPFETENATVPNPIFHFTCLDASLAIAP
VFERFSSVIITSGTISPLDMYPKMLKFDAIVQESYAMTLTRQCFLPLVITRGSDQVAISS
RFEVRNDPAVVRNYGSILIEYAKCVPDGIVAFFPSYLYMESIVAAWHDMGILDEVWKYKL
IFIETPDAPETSIALENYRRACDNGRGAILLSVARGKVSEGIDFDHNYGRAVIMFGVPYQ
YTESRILKARLEFLRDNFRIRENDFLTFDAMRHAAQCVGRVLRGKTDYGLMVFADKRFAR
ADKRNKLPKWIAQYIKETHSNLSTDMAIVESKLFIRSMAQPYPEGKNGVSLWELADIESR
QAKERETFAKLMGGQLKVDANGEVVDKDDSYSDMEDDGKQEDDFDKEFGEGHDLVQINEM
DQVMQEV
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctacatcgacgagctccccgtgctattcccttaccccaagatctatcccgag
caatatgcctacatgaccgatctcaaacgcaccctcgatgccaacggccactgcgtcctc
gagatgccatcaggaaccggaaagaccgtctcactgctcagtttgatcgtatcctaccag
ctctttcaccctgccaagcgcaagctcatctactgctcgcgtaccgtgcccgaaatcgaa
aaggcgctcgctgagttgaagcgtctgatggaatacagagcaaggtacaacgtcaaggaa
ggcgaagagtcagaggtgatcaaaaacgaggcagagggcagcaacggtccaggagaacac
aacactgagatgaaagggaaaggcaaagcgggtggtcagatggaagatatcctcgccttg
ggcctcagttcgcgtaagaacctctgcatccatccagacgtcagccgcgaacgcaaaggc
aaagtcgtcgacgcaaggtgcagagatatgaccagcagttgggcttgcgagaaaggccgt
caagatccgggcagcgtcgagctttgcgacttccatgaagaactcggcaagatggaacca
ggccaactcatcccgcaaggcgtatggacgctagaagaagtcaaagagtatgcgcgcgac
aagggcatctgtccttactttgccatccgacgcatgctccccttcgtcgacatcatcatc
tacagcttccactatcttctcgatcccaagatcgccgagcaggtcagcaaggagatgagc
aaagacgccatcgtcgtgttcgacgaggcccacaacatcgacaacgtctgcatcgagtcg
ctgtccatcgatctcacacggcctatgctcgacagcgcataccgcagtattaatcatctc
tcggaacgtgtcgacgaaatcaaaaagacggatgcatccaagctgcaggacgagtatgca
cgcctcgtcgagggtttgcaagagcagggcgagcagagggaggccgagtccttcatggcg
aatcccgtgcttccagacgacctcttgcaagaagcgatacccggcaacattcgtcgtgcg
gaacactttgtcgccttcctcaaacggttcgtcgagtacctcaaaacacgcatgcgtgtc
ctccacgtcgtcgcagaaacaccggcgagtttcctgcagcacttgaaagacatcacctac
atcgagcgaaagccgttgcgcttttgcgccgaacgactccgcatgctcgtcagcacgctc
gaactcacccgccttgacgaattttccgcattgcagaaggtcgcagcgttcgccaccctc
gtcgccacctacgacaaagggtttctgctcatcctcgagccctttgaaaccgagaacgca
actgtgcccaaccccatcttccatttcacttgtctcgacgcaagtctcgccatagctccc
gtcttcgaacgcttctcgagcgtcatcatcaccagtggtaccatcagcccgctcgacatg
taccccaagatgctcaagttcgacgccatcgtccaagagtcgtacgccatgacgctcact
cgccaatgtttcctgcccctcgtcatcacaagaggcagtgaccaggtcgccatcagctcg
cgcttcgaggtgcgaaacgatccagccgtggtgcgcaactacggcagcatcctgatcgag
tatgccaagtgcgtaccggatggcatcgtcgccttcttcccctcttacctgtacatggag
agcatcgtggctgcatggcacgacatgggtattctcgacgaggtgtggaagtacaagctc
atctttatcgaaacgccagatgcgcccgaaacgagtattgccctcgagaactaccgcaga
gcgtgcgacaacggccgtggtgccatcctgctgtccgtcgcaagaggcaaagtgtctgaa
ggcatcgatttcgatcacaactatggacgcgccgtcatcatgttcggtgtgccctatcaa
tacaccgagtcacgtattctcaaagctcgattggagtttctgcgcgacaacttccgcatc
cgtgagaacgattttttgaccttcgacgcgatgcggcacgcggctcagtgcgtgggacga
gttctgcgaggtaagaccgactacggtctcatggtgtttgcggacaagcgattcgcacgt
gccgacaagcgcaacaagcttcctaaatggatcgcacaatacatcaaggagacgcattcc
aacctgtcgacagacatggccattgtcgagtcgaagctctttatccgttccatggcgcaa
ccgtatccagagggcaagaatggagtcagtttgtgggaactcgccgatatcgaatcgcgg
caggccaaggaacgggaaacgtttgcaaagctcatgggtggacagctcaaggtggatgcc
aacggagaggtggtcgacaaggacgacagctattccgacatggaagatgacggcaagcaa
gaggacgatttcgacaaggagttcggcgagggccacgatcttgttcagattaatgagatg
gatcaagtcatgcaggaagtctga
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