Sporisorium graminicola: EX895_001603
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Entry
EX895_001603 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgra03009
]
EX895_001603
Ribosome biogenesis [BR:
sgra03009
]
Eukaryotic type
90S particles
Other 90S particles
EX895_001603
Pre-60S particles
Other pre-60S particles
EX895_001603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
MMS19_C
CMV_UL34
Motif
Other DBs
NCBI-GeneID:
40724498
NCBI-ProteinID:
XP_029741057
UniProt:
A0A4U7L1G6
LinkDB
All DBs
Position
SGRAM_12:165276..169712
Genome browser
AA seq
1478 aa
AA seq
DB search
MASIDMDASAAAASLDSLHSALSKIRHHTNSKLENQKGPAQLLVAVEATLGEQDASHGST
SASGAAASRHASAQRAPAEYFLALESMLELAKSPSSPPSLMNNVVYLLSIVAPHVSSGIL
RAKLASIVPAIGKLLTNPHPTTFNVNDTSAAENYASALKSALAILQAIYTAFESDVSALE
RDVPLRSCWSATLNLCADSRPKVRRRAQLLATTILPTTAAASVKPYHPYLKLTFDWIIST
LTHVADAGSVSSSSTKNKNTKNKKKDDPLHPKYDRKSGTAKQAQAAAALRQNQGDTASVG
IWVCGFAKQMINILPISQVDELVAALLRLPGIQNPFLTVAAFDVFEAFLKACRPSISSGA
AQADALLIQSHVTSTSSSIGENALASLLESLRSPAFVPSTSDVQLLPAYLRALEHAMSAY
SRFEKGVPAWRLAPQVWIDVFALSLSAKSDASRTAPAVRSAGRDTLIALLRYCVPDAAIA
DSLKASFSKKKAANTPLLDMIQSIEDALGKDSLQYMHSRAEILSVLASLIARLRYHYVPN
TLPPHPAAASLTMHIVQTIAQLRQQDNFEHREYADAVIAAAVEVCGPRLLLDALPLNLFG
EADGPGRAWLLPLIRTKINNTELGHFTVDLVALSEKIFNKRQEAETDGRPVEAKMYEALT
EQIWALFPAYCAMPRDLLSAFTRPFAELLTNVLYTQPNLRPSICRGLQALVYRNEALVSS
GAPSDSLKHAFGLDQEDGKANIAHLSAIAPNQLAVLFNVFSQSPGEGRGFVYDTIAAYLR
VMSPQDVQNTYTKVKTTLEQALPQLSTKQKRNQKENPNTPPPVPYTMLDLLSALIPHLDK
SAHGSAADLFALICQDNVLRSHDSTVQKKSYRILSRLLEGDAGKQILLVTDGAQGANRVG
DLLDKLRESTASVALGAKRDRVLLLATLVPSIPSDELHHLPSIIPEAVLATKEVNALTRQ
NAYELLVQMGYKMEQGGVINRALVEGHGAAAAEAEQDDSEMPEGGVVSASISEYLTMVAA
GLAGTTPHMISATITALSRLVYEFKETLEQSVLDELLSTIEVYVQSANREIVKSAIGFVK
VAIVDFNTALIDSHLPKLIPALLGWSTEHKQHFKVKVRHIFERLLRRFGFERIYQLTDED
NRKLINNIRKRKERAKRKKADAAAEREAGVLEDDDDEPGLAPRILKTKGGNDAFEEVVYG
SESDISDSDDDADAEEGKAEGRKGGTAAALARNRNRKNGGEGERERGNRRRAKQQDEAYI
EMDDDDDVPMDLLDRSATARISLTNPNAKNAANGRNKKRQPGQEASKFALDEATGRMLID
DDDEPAGGKAKRVSFADGGSDGQPVDVEGAGTAYINQARGVDGMAQVRGGAVKFNKNNKR
TREAEREMELEQMALEESQDRARQVQSGRPTTQVDRKKRVKETIGKEFRAKRGGGDVIRN
GKSPYAYVPLSQVAGKKAGKNSDNVSYTGKGDKSRKRR
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgatcgacatggatgcttcggcagccgccgctagccttgacagcctgcacagc
gcgctctccaagattcgccaccacaccaactcgaaactcgaaaaccaaaagggtcctgca
cagctgctcgtcgctgtcgaagcaaccctcggcgagcaagacgcttcccatggctccaca
tctgcatcgggagcagccgcctctcggcatgcttccgctcagcgtgctcccgcggagtac
tttctcgccctcgagtcgatgctcgagctggccaaatcgccctcctcgccgccttcgctc
atgaacaacgtcgtttatctcttgtccatcgtcgccccccatgtctcctcaggcatcctc
cgcgccaagctcgcttccatcgtccctgccattggaaagctgctcaccaaccctcacccc
accaccttcaacgtcaacgacacctcggccgcagagaactacgcatccgcgctcaagtcg
gcactggccatcctccaagccatctacacggcctttgagtcggacgtctctgccctcgaa
agggatgttcctctgcgttcctgttggtcggcgaccctcaatctctgcgccgattcgcgt
cctaaggtgcgaagacgtgcgcagctcctcgccaccaccatccttcccaccacggccgct
gcttccgtcaaaccgtatcacccctacctcaagctcacctttgactggatcatctcgact
ttgacgcatgtcgctgatgccggctccgtttcttcctcgagcaccaagaacaagaatacc
aagaacaagaagaaggacgacccactccacccgaagtacgaccgaaagtcaggtacagcc
aagcaagcacaagccgccgccgcactccgacagaaccaaggcgacactgcctccgtcggc
atctgggtttgcggctttgccaagcagatgatcaacatcctacccatctcacaggtcgac
gaactcgtggctgccctgctccgcttaccaggtattcaaaaccccttcctcaccgtcgcc
gctttcgacgtgttcgaggccttcctcaaggcctgccgacccagtatttcttcaggcgca
gctcaggcagatgcgctcctcatccagtcgcacgtcacttccacatccagcagcattggc
gaaaacgcgctggccagtcttctcgaatcgctccgctcgcccgcctttgtcccctcgact
tccgacgtccagttgctgcctgcctacctccgcgcactcgagcacgccatgtctgcctat
tcgcgattcgagaaaggcgtgcctgcatggcgtctcgctcctcaggtctggatcgacgtc
tttgcgctttcactcagtgccaagtcggatgcatcgcgcaccgcccctgccgttcgctct
gccggtcgtgacaccttgatcgcccttttgcggtactgcgtgcccgatgctgccatcgcc
gattctctcaaggcatccttctccaagaagaaggccgccaacactcctttgctcgacatg
atccagtcgatcgaggacgcgctgggcaaggactcgcttcagtacatgcattcgcgtgcc
gaaatcctctccgtgctcgcctcgctcattgcgcgcctccgataccactacgtgcccaac
acgctgcctccccaccccgctgctgcctcgctcaccatgcacatcgtccagaccattgcc
cagctgcgtcagcaagacaactttgagcaccgcgagtacgccgacgcggtcatcgctgct
gccgtcgaagtgtgtggcccgcgtctgctcctggatgctttacctctcaatctatttggc
gaggcagacggtccgggtcgtgcctggctactcccgctaatccgtaccaagatcaacaac
accgagctcggccatttcaccgtagatctcgtggcgctgtcggaaaagatctttaacaag
cgccaggaagctgaaaccgatggacgtcctgtcgaggccaagatgtacgaggcactcacc
gagcagatctgggcactcttccctgcctactgcgccatgcctcgcgatctgctctctgcc
tttactcgtccgtttgccgagcttttgacgaacgtgctctatacacagcccaacctgcgc
ccctcgatctgccgaggtcttcaagccctcgtttaccgcaacgaagcgctcgtctcgtct
ggtgctccctcggattcgctcaagcatgctttcggactcgaccaggaggacggcaaggcc
aacattgctcatctctcggccatcgctcccaaccagcttgccgttctcttcaatgtcttt
tcgcagtcgccgggagaaggccgtggtttcgtctacgacaccattgcagcctatctgcgc
gtcatgtcgccgcaggacgtgcagaacacctacaccaaagtcaagaccacgctcgagcag
gcgttgccccagctttccaccaagcagaagcgcaaccagaaggagaaccccaacacgccg
ccacctgtgccttacacgatgctcgatttgctctccgcgctcatcccgcatctcgacaag
agcgcgcacggctcggccgctgacctcttcgcactcatctgccaggacaatgtgctgcgc
tcgcacgattcgacggtgcagaagaagagctaccgtatcctcagccgtctgctcgaaggc
gatgccggcaagcaaatcctgcttgttactgacggggcccaaggcgcaaaccgagtggga
gatttgctcgacaagctgcgcgagtcgacggccagcgtcgcgctcggtgccaagcgcgac
cgtgtgctcctcctcgccaccctcgtgcccagcatcccttccgacgagctccaccacctg
cccagcattatccctgaagcggtgttggccacgaaggaggtcaacgcactcacgcgtcag
aatgcctacgagctgcttgtccagatgggctacaagatggagcaaggcggtgtcatcaac
cgtgcgctcgtcgagggtcacggcgcagctgccgccgaagcagaacaagacgacagcgag
atgcccgaaggcggtgttgtttcggcctcgatcagtgaatatctcaccatggtcgcggcc
ggtctggccggtaccacgccgcacatgatcagcgccaccatcactgccctttcgcgcctc
gtgtacgagttcaaggagacgctcgagcagagtgtcctggacgaactgcttagcacgatc
gaagtctatgtgcagtcggccaatcgcgaaattgtcaagtcggccattggttttgtcaag
gtggccattgtcgatttcaacacggcgctgatcgactcacacctgcccaagctcatccct
gccctgctcggatggtcgacggagcacaagcagcatttcaaggtcaaggtgcgacacatt
ttcgagcgcctgctgcgtcggttcggttttgaacgcatctaccagcttacggacgaagac
aaccgcaagctgatcaacaacatccgcaaacgcaaggagcgggccaagcgcaagaaggcc
gatgctgctgctgagcgcgaggctggcgtgctcgaggacgacgatgacgagcccggcctg
gcgcctcgcattcttaagacgaaaggcggtaacgatgcgttcgaggaggtggtgtacggc
tccgagtcggacatttccgattcggacgacgatgctgacgcagaagaaggcaaggccgag
gggcgcaagggcggtacagcggctgcgctagctcgcaaccgcaaccgcaagaacggcggt
gagggcgagcgagagcgcggcaatcgccgtcgcgccaagcagcaggacgaggcgtacatc
gagatggacgacgacgacgacgttcccatggacttgctcgatcgcagtgccaccgcgcgc
atctcactcacgaacccgaacgccaagaacgccgccaacggccgcaacaagaagcgtcag
cccggccaggaagcgagcaagtttgcgctcgacgaggccacgggacgcatgctcatcgac
gacgacgacgagcctgccggtggtaaggcgaagcgtgtctcgtttgctgacggcggcagc
gacggccaacctgtcgatgtggaaggcgccggcaccgcctacatcaaccaagcacgtggt
gtcgacggtatggcgcaggtacgtggaggagcggtcaagttcaacaagaacaacaagcgc
acgcgcgaagccgagcgcgagatggagctggagcagatggcactcgaggagtcgcaggat
cgagcacgacaggtccaatcgggcagaccgacgacgcaggtcgacaggaagaagcgcgtc
aaggagacgatcggcaaggagttccgtgcgaagcgcggcggcggtgatgtgatcaggaac
ggcaagagtccgtacgcctatgtgccgctgagccaggtcgcgggtaagaaagcaggcaag
aacagcgacaatgtgtcgtacacgggcaagggcgacaagagccgaaagcgtcgttag
DBGET
integrated database retrieval system