Sporisorium graminicola: EX895_001947
Help
Entry
EX895_001947 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K03360
F-box and leucine-rich repeat protein GRR1
Organism
sgra
Sporisorium graminicola
Pathway
sgra04111
Cell cycle - yeast
sgra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EX895_001947
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
EX895_001947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgra04121
]
EX895_001947
Ubiquitin system [BR:
sgra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
EX895_001947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_FBXL15
LRR_SKP2
F-box-like
LRR_At5g56370
LRR_4
LRR_6
LRR_At1g61320_AtMIF1
F-box
DUF8346
LRR_MHP1-HER1-GIP3
F-box_COS111
LRR_14
Motif
Other DBs
NCBI-GeneID:
40724842
NCBI-ProteinID:
XP_029741401
UniProt:
A0A4U7KYJ0
LinkDB
All DBs
Position
SGRAM_12:1153657..1156404
Genome browser
AA seq
915 aa
AA seq
DB search
MSNTADSSPRGSNSPSPYPYQGGRTPIDAIIASARAGSSSRRNLVDTEMEDRSESPAEFA
ARNGTSLPRPPPSPSSTSQSDDGGAQEDFADLASIDDADTKRGAVERSFDPSAVRLSRRG
TLVPASPTSSNGTWILQDAPLSTASNLPHEILLHIFKYLVLYPPDLLSCLLVCKSWCLNG
VELLWHRPALFKISSLFKLVGVIRKPEQLFPYADFVRRLNFTLLANQLEDQLFSMMSACT
RLERLTLAGCSNITDATLVKVFQNTPQLVAIDLTDVADISDATLLTLAANCPKAQGINLT
GCKRISSKGVAELARSCKFLRRVKLCGCDNVDDEALLALTEHCPSLLEMDLIHCSKISDK
SVREIWTRSFQMRELRLAHCTELTDNAFPSARGTTGVSMLGTSHSHGSRSGMIAASAFAS
ESAPTSRGASPSVNAAMDTRRDGGLTGSASILSDLGGHSRLFDHLRVLDLTSCTSISDDA
VEGIVANVPRLKNLALTKCTRLTDEALYSIAKLGKNLHYLHLGHVSNITDRAVTHLARSC
TRLRYIDVACCPNLTDLSVTEIANNMPKLRRIGLVKVVNLTDQAIYGLVDRYNSLERIHL
SYCENVSVPAIFCVLQKLGRLTHLSLTGVPAFRRPELQAMCRAPPKDFNEHQRQAFCVYS
GKGVHDLRKFLQRVYSDEQLAAEFGGSEARARNALGGLGDIDVVGVNGNGHGAGGLHQPH
ALAQPHPHAAAFGGLTGAAGMGYAPPQSLAPAATGLGGGGARGAPRHHDAELVTRHLELT
PAEEMYYEQQRRLARYANARRAAEDAALLNRPTLMDGANRRVLADAQEARNPGVPLVGET
LGQPMAEDEVEEDEAEEYGTPDAQDMADAEPQHGFGQGGVPQGIQQQARGPIPPDEEGVV
DRDRLRALRGARFGA
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacagcagattcctcgccaaggggctcgaattctccttcgccatatccatat
caaggtggcaggacccccatcgatgccattatagcctcggctcgtgccggttcttcttcc
cgcaggaatcttgtcgacacagagatggaggatcgttccgaatcccccgccgaattcgct
gctcgtaatggcacctcgctgcctcgtccgccaccgtctccctcaagcacctctcagtcc
gatgacggtggagcacaggaagacttcgccgatctcgcctccatagacgacgcggacacc
aagcgaggcgccgtcgagcgctcctttgatccgtccgctgtccgcctatctcgccgtggc
acccttgtgcccgcctctcctacatcctccaacggcacctggatcctccaggatgcgccc
cttagcaccgcatccaaccttccacacgagattctcctccacattttcaagtatctcgtc
ctctatcctcccgatctgctctcgtgcctgctcgtctgcaaatcatggtgcttgaacggc
gttgagctgctgtggcatcgccccgcgctcttcaaaatttcttccttgttcaagttggtc
ggcgtcattcgtaagccggagcagctcttcccgtacgccgactttgtccgcaggctcaac
ttcacgttactcgccaaccagctcgaggaccagctcttctccatgatgtcggcgtgcacg
cgcctcgagagactcacgcttgctggctgctccaacatcacagacgccactcttgtcaaa
gtgttccaaaacacgccacagctggtagccattgatctcacagacgtcgccgacatctcg
gacgccaccttgctgacgctcgcagcaaattgtcccaaagctcaaggcatcaacctcacc
ggctgcaaaaggatctcgtccaaaggcgttgccgagcttgcccgcagctgtaagtttcta
aggagggtcaagctgtgcggttgcgacaacgtcgacgacgaggcgctgctcgcgttgacg
gagcactgcccttcgttgttggagatggatctgattcactgctccaaaatatcggacaag
tcggttagagaaatttggaccagaagcttccagatgcgcgagctccgcttagctcattgt
acggagctcacagacaatgccttcccttcggcgcgcggaaccacgggcgtgtccatgctg
ggtacctcgcattcgcacggctcacgctccggcatgatcgctgcatcggccttcgcaagt
gagtcagcacccacaagtcgtggggcatctccaagtgtcaatgcggcaatggacacaagg
cgcgatggcggactcacgggctccgctagcatactcagtgacttggggggtcacagccga
ctctttgaccatctgcgcgttttggacctcaccagctgcacgtccatttcagacgacgcg
gtcgaaggtatcgttgccaatgtgcctcgcctcaagaaccttgccctcaccaaatgcacg
cgcctcaccgacgaagcgctgtatagcatcgccaagctcggcaaaaacctgcactacctc
cacctcggtcacgtctccaacattaccgatcgcgccgtcacccatctagcacgctcctgc
acgaggttgcgttacattgacgtcgcctgctgtccgaacttgaccgacctttcggtgacc
gagattgcgaacaacatgccgaagctccgccgcattggactggtcaaggtggtcaatctg
acagatcaggcgatctacgggctggtagataggtacaattcgctcgagcgcatccatcta
tcgtactgcgagaacgtctcggtgcctgccatcttttgcgtgctgcagaagctgggtcga
ttgacgcatttgagtctgacgggtgtgcctgcgtttagacggcccgagctgcaggccatg
tgcagggcgccgccgaaggatttcaacgagcaccagaggcaagcattctgcgtgtacagc
ggtaaaggtgtgcatgatcttcgcaaatttttgcagcgagtgtatagcgatgaacagcta
gcagcggagttcggagggtcggaggcgagggcgaggaacgcgttgggtggattgggtgat
attgacgtagttggtgtcaatggaaacggtcacggagcaggtgggctccaccagccgcat
gcgctcgcccaacctcatccgcacgctgcagcgtttggggggctgactggagcagcaggc
atggggtacgctccgccacaatcattagcacccgcggcgacgggtctcggtggcggaggc
gctcgcggtgctccccgccaccacgacgccgaacttgtgacacgacatttggagctcacg
ccggcggaagagatgtactacgagcagcagcggcgtcttgcgcgctatgcgaatgcacgt
cgagccgccgaagacgcagcgctgctcaaccggcctacgttgatggacggcgcgaatcga
cgcgtgctggcggatgcgcaggaggctcgcaaccccggagtaccgttggtgggcgagacg
ctggggcagccgatggcggaggacgaggtggaggaggacgaggcggaggagtacggcacg
ccggatgcgcaggatatggctgatgctgagccgcagcatgggtttgggcagggcggtgtg
ccgcaggggatccagcagcaggcgcgaggaccaataccaccagacgaagagggcgtggtg
gatagagaccggctgcgcgctctgagaggcgctcgtttcggcgcttag
DBGET
integrated database retrieval system