Sporisorium graminicola: EX895_002041
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Entry
EX895_002041 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K14319
Ran GTPase-activating protein 1
Organism
sgra
Sporisorium graminicola
Pathway
sgra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EX895_002041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_002041
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
EX895_002041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_8
DUF4770
Motif
Other DBs
NCBI-GeneID:
40724936
NCBI-ProteinID:
XP_029741495
UniProt:
A0A4U7KY67
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All DBs
Position
SGRAM_12:complement(join(1420585..1421589,1421688..1421882))
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AA seq
399 aa
AA seq
DB search
MSDEPRIFSLVGQGLKLDSKADIQPHLDKLEQIAHLEEIHLGGNTLGVEACQALANVLKT
KKTLKVADLADIFTGRLISEIPDALRALCDALTDHTSLVELNLSDNAFGGRSAEPMVNFL
KNNHSFSVLKLNNNGLGITGGTIVAEALYEAAQNLKTKGLESKLRTVICGRNRLENGSAP
VWAKAYAAHGGLLEVRMFQNGIRMEGIEAISKGLASCPNLEVLDLQDNTATLRGSRAIAA
CLPKWPKLKTLNLSDCLLKPKGGALVFGALANGSNPELETIQVQYCDLDRKVLDQLGSAI
ELHLTKLTKLDINGNWADEDDECIEKIKSALAKHDHEDALQELDEMDPEGEESEAEDEDE
DEDEDEEHEQDDAEEGQAKPDETDELADALAKTSVADEK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgagcccaggatcttctccctcgtcggccagggcctcaagctggatagcaag
gccgatatccaacctcacctcgacaagctcgaacagatcgcccacctcgaagaaatccac
cttggaggtaacacactcggtgtcgaggcatgccaggcgcttgccaatgtattgaagacc
aaaaagacgctcaaggtggccgaccttgccgacatctttacggggcggctcatctcggaa
atcccagatgctctcagggcattatgcgacgctcttaccgaccacactagcctcgtagag
ctcaacctctcggacaacgcattcggcggacgatcggctgaacccatggtcaacttcctg
aaaaacaaccacagcttctcggtgctcaagctcaacaacaacggccttggcatcacaggc
ggtaccatcgttgctgaagcgctctacgaagccgcgcaaaacctcaagaccaagggcctc
gagtcgaaactgcgcaccgtcatctgtggacgcaatcgactcgaaaatggctcggcaccc
gtttgggccaaagcatatgcagctcacggagggttgctcgaagttcgcatgttccagaac
ggcatccgaatggaaggtatcgaggccatcagcaaaggactcgcttcgtgtcctaacctc
gaagtgctcgacctccaagacaacacggcgacgctgcgaggatctcgtgccatcgccgct
tgcctgcccaagtggcccaagctcaagacgctcaatctctcagactgtttgctcaagccc
aagggaggcgcgcttgtgtttggtgcactcgccaacggcagcaaccctgagttggagacg
atccaagtgcagtactgcgatctcgaccgcaaggtgctcgaccaattgggcagcgccatc
gagctccatttgaccaagctcaccaagctggatatcaacggcaactgggctgacgaggac
gacgagtgcattgaaaagatcaagagcgctctggccaagcacgaccacgaggatgctctg
caggaactcgacgagatggaccccgaaggcgaggagagcgaggcggaagacgaggacgag
gacgaggacgaggatgaggagcacgaacaagacgacgctgaggagggccaggccaaaccc
gacgagactgacgagctcgctgatgcacttgcaaagacctcggtagcggacgagaagtga
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