Sporisorium graminicola: EX895_002116
Help
Entry
EX895_002116 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
sgra
Sporisorium graminicola
Pathway
sgra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EX895_002116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_002116
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EX895_002116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
40725011
NCBI-ProteinID:
XP_029740860
UniProt:
A0A4U7KVY5
LinkDB
All DBs
Position
SGRAM_13:187925..188851
Genome browser
AA seq
308 aa
AA seq
DB search
MSRYDRRRVNGPPSYVPIYDSASSTAAIASTSAPIATTSQLRPDKRSYADLRPIFLQTNL
VPSASGSSYVEIGDLKLACSVFGPRQVKGRQYSGKAELNVEVKFAPFSSRRRRKPGKTTE
SAHLSSVLHQALLPSLRLDLLPKASLDIHIMVLQTDGLEECCIAAACIAASTALASAGIE
MYGIVVGTVALIPSSVELAHDKRILLDPSSADLGLVSGMKTASRVLMCGMPALASVTCLN
VSAGSNQLMLKSQNPRSMSLCAGVEADTLDEALAAINAGLVDIHKVVAQALAEDFQRRSA
LTNSSTPH
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggtacgacaggagaagggtcaatggaccgcctagctatgttcctatctacgac
tcggccagctccaccgctgccatcgcatccacctcggcacccatcgcaaccacatcgcag
ctgagacctgacaagcggtcatacgccgacctgaggcccattttcctacaaacaaacctc
gttccgtctgcatcaggcagctcgtatgtcgaaattggcgatttgaagcttgcttgctcc
gtgtttggtcctcgacaggtcaaaggacgacagtacagcggcaaggcagagttgaacgtc
gaggtcaagtttgcgcccttttcgagccggaggaggagaaagccagggaagacgacggaa
agcgcgcatctctcgagcgtgctgcatcaagcgctgctgccatctttgcggctcgacttg
ctgcccaaagcgtcgctcgacatccacattatggtactccaaacggatgggttggaggaa
tgctgcatcgccgctgcgtgtatcgctgcgtcaaccgcgcttgcttcagcgggcatcgag
atgtacggcattgtcgtagggaccgtcgctctcatcccttcgtctgttgaactagctcac
gacaaacgcatacttctcgacccgagttcagccgaccttgggctcgtctcgggcatgaag
accgcttcgagagtgctcatgtgtggcatgcccgccttggcttcggtgacgtgcctgaac
gtctcagctggttcaaaccagctcatgttgaagagccaaaacccacgaagcatgtcgcta
tgcgccggcgtcgaggcagataccctcgacgaagctctcgccgccattaacgcaggcttg
gtcgacatccacaaggtcgtcgctcaagcccttgctgaggactttcaacgtcgaagcgcc
ttgacgaactcgagcactccgcactga
DBGET
integrated database retrieval system
