Sporisorium graminicola: EX895_002168
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Entry
EX895_002168 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
sgra
Sporisorium graminicola
Pathway
sgra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EX895_002168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgra03041
]
EX895_002168
Spliceosome [BR:
sgra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
EX895_002168
Complex C
U4/U6.U5 tri-SnRNP related factors
EX895_002168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
ArgoN
Motif
Other DBs
NCBI-GeneID:
40725063
NCBI-ProteinID:
XP_029740912
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All DBs
Position
SGRAM_13:327164..328225
Genome browser
AA seq
353 aa
AA seq
DB search
MANATIRGAVSIHGTNPQFLIEKPVRARIYESPYWKEHCFALSASTILPLATSLHHIGGL
VGLQRPSHFLCLLQKLLQIQPEPAIVNAYLNARQFKYLRALAAFYIRLTYKSTDIYTLLE
PLLEDGRKLRWRGSGGEFSIVHMDEWIDMLLTEERVCDIILPRLTKRDVCETRDGLPPRI
SKLEISLLKAVQSGGEAAQDGEVSSGSDDSDDSLADVKRWKLQRLKQSVHVSRSKEELGT
EGAYDGAQEAYTSQEESDDEDGAATKRRRFISPSPSVSPDRQLPTSVGQTVEEEGYVSRS
PSRSPDRDGYVSRSPSLSPDRLASSSAVDEEGQIASDQGGYISRSPSRSPDRT
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgctaccatccgaggcgcggtcagcatccacggtaccaacccgcaattcctc
attgagaaacctgtccgcgcacggatctatgaatcaccctactggaaggaacactgcttc
gccctctcggcctccaccatcctcccgctcgccacatctctccaccacatcggcggccta
gtcggcttgcagcgaccctcacacttcctctgcctactccaaaaactgctccagatccaa
ccagaacccgctatcgtaaacgcataccttaacgcacgccaattcaaatatctgcgcgca
ctcgcggcgttttacatccgactcacgtacaagtccaccgacatctacaccctcttggaa
ccgctgttggaagacggaagaaagctcaggtggaggggcagtggcggagagttttcgatc
gtgcatatggacgagtggatcgatatgctgctgaccgaggaaagggtatgtgatatcatc
ctgcccagattgaccaagagggatgtgtgcgagacgcgggatggcttacctccaaggatc
agcaagctcgaaatttcactgctgaaagctgttcagtccggcggagaggcagcgcaagac
ggcgaggtgagcagtggcagcgatgacagtgacgatagcttggcagacgtcaaacggtgg
aagttgcagcgactcaagcagtctgtacatgtgtcgcggagcaaggaggagttgggaacg
gaaggcgcatatgacggtgcgcaagaggcgtacacctcacaagaggagtctgacgacgaa
gatggggcagcaacgaagagaagaagattcatctcgcccagtccgagcgtttctcccgat
cgacaattgccgacatcagttggacaaacggtggaggaggaaggttatgtgtcgagatct
ccaagccgctcgcctgatcgcgatgggtacgtttcaagaagtccttcgctttcacccgat
cgtctcgcctcgtcatcagccgtcgacgaagaaggtcaaatagcgtcagaccaaggaggg
tatatttctcgctcgccttcacggtcacctgatcgtacctaa
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