Sporisorium graminicola: EX895_002187
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Entry
EX895_002187 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
sgra
Sporisorium graminicola
Pathway
sgra03030
DNA replication
sgra03410
Base excision repair
sgra03420
Nucleotide excision repair
sgra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EX895_002187
03410 Base excision repair
EX895_002187
03420 Nucleotide excision repair
EX895_002187
03430 Mismatch repair
EX895_002187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgra03032
]
EX895_002187
03036 Chromosome and associated proteins [BR:
sgra03036
]
EX895_002187
03400 DNA repair and recombination proteins [BR:
sgra03400
]
EX895_002187
DNA replication proteins [BR:
sgra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
EX895_002187
DNA Replication Termination Factors
ELG1-RFC complex
EX895_002187
Chromosome and associated proteins [BR:
sgra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
EX895_002187
DNA repair and recombination proteins [BR:
sgra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
EX895_002187
Check point factors
HRAD17(Rad24)-RFC complex
EX895_002187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_24
AAA_assoc_2
RuvB_N
AAA_11
AAA_14
DUF815
AAA_22
RCF1-5-like_lid
AAA_5
AAA_30
AAA_16
ResIII
AAA_7
WGG
DEAD
Mg_chelatase
AAA_28
AAA_3
AAA_19
Viral_helicase1
nSTAND3
FtsK_SpoIIIE
bpMoxR
AAA_25
RNA_helicase
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
40725082
NCBI-ProteinID:
XP_029740931
LinkDB
All DBs
Position
SGRAM_13:complement(join(376874..376964,377080..377584,377700..378138))
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AA seq
344 aa
AA seq
DB search
MNSKGKGKADDTSTSASTDQQLDLLPWVEKYRPATLDDLVSHKDITSTIQNFIDKNRLPH
LLFYGPPGTGKTSTILAMARKIFGPQFRNSVLELNASDDRGIEVVREQIKSFASTKSVFS
SKGGFKLIVLDEADAMTQAAQGALRRVIEQYTKNVRFCIICNYVNKIIPAIQSRCTRFRF
NPLELDQVEDRLNHVIETEGCKITQDGKEALLKLSRGDMRRALNVLQACHAASDNIDETA
VYNCTGNPHPQDVEAVLKSMMEDEFTTAFRTVSELKTAKGIALADMISGVYDLLATIKLP
AKSRIYLLDHLADTEHRLSTGGSEKIQLTALLGAVKVAVELSQA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaactccaagggtaaaggcaaggccgatgacacttcaacctcggcgtcgaccgatcaa
caacttgacctgcttccctgggtggaaaagtaccgcccggcaacactcgacgacctcgtc
tcccacaaggacatcacctccaccatccagaacttcatcgacaagaatcgtctgccccac
ttgctcttctacggtccaccgggaactggaaagacgtcgactatcctcgccatggcacgc
aagatctttgggccacagttccgtaacagcgttctcgagcttaacgcgtccgacgacaga
ggtatcgaggtggttcgggagcagatcaagagtttcgctagcaccaagagtgtatttagc
tccaagggcggtttcaagctcatcgtgctcgacgaagctgatgctatgacgcaggctgcc
cagggtgcgctcagacgagtgattgagcaatacacgaagaacgtgcgattctgcatcatc
tgcaactacgtcaacaagatcatcccggccatccagtcgcgatgcacgcgattccgattc
aacccgctcgaactcgaccaggtggaagatcgcctcaaccacgtcatcgaaacggaaggc
tgcaagatcacgcaagatggaaaagaagcgctgctcaagctgtcgcggggcgacatgcgt
cgcgccctcaacgtgctgcaagcgtgccacgctgcttcagacaacattgacgagacggca
gtttacaactgtacgggcaacccgcatcctcaggatgtcgaggccgtgttgaagtccatg
atggaggacgaattcaccacggcgttcaggacggtgtcggagctgaagacggcaaagggc
attgccttggctgatatgatcagtggagtgtacgatctgttggcgacaatcaaactaccc
gccaaatctaggatttacctgttggatcacctcgccgataccgaacatcgactgagtaca
ggtggctcggaaaagatccaactcaccgctctgctaggtgctgtcaaggtcgctgttgag
ctctcgcaggcataa
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integrated database retrieval system
