Sporisorium graminicola: EX895_002232
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Entry
EX895_002232 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgra03009
]
EX895_002232
Enzymes [BR:
sgra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EX895_002232
Ribosome biogenesis [BR:
sgra03009
]
Eukaryotic type
90S particles
Helicases
EX895_002232
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
OB_NTP_bind
AAA_22
WHD_HA2
DEAD
ATPase
AAA_19
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
40725127
NCBI-ProteinID:
XP_029740976
UniProt:
A0A4U7KWC1
LinkDB
All DBs
Position
SGRAM_13:489376..494247
Genome browser
AA seq
1623 aa
AA seq
DB search
MKKPVKERYNAKARGSSVGGSSHKNKRSLRQREADAYDSNAQLIVPGSEEDLRRKEAEQK
RKQLLESSGQDASAPMSSKKRKRLDAYIASRIKKEERVKIMAKLAQTSAEVDRTTLKSAA
TLGTGRAKTMEERIDTAGQKTDRGGKRRRKTMNGAAMQIEEDDDDADLDDLQSTHGHDDD
EDEGNFTPTEDVKDDDQDSGPVGEVEEDPARRARIIAAASLFDKSKPPTAAVASSSSSSA
PVPGSALASALGSALATDAHGNPILPTMRKRTKKPKATRVNATTRLQQTRESDSSFDSSD
SEGDFDSASASASRPAPLQVNRDLIGPAPRASLSRKNQEKRLAQQTIDIKGKTKAVAFGP
GWDPQDSDDEQPTSHPVKAAHELEADMDDDEDDDSDLGSEEPDTDEYEDDIFLEAMRRRG
LLQAEAEASSSGSSNPSTSAPAGTKALALSKSEPNGVDDGDSSNQSEPEGDDDVDDDSNS
DEDMDEDDEEDEEEDDDEEEEDEEEEDEDKDEEEHTEEYRSRRRGIGTTKRSSGFKDWAR
AALGIGGSATKPTRDDLAQGTEANDIEEGDTAYNLEPVAGFKVKVGDIMPKDGVARGPLG
RDEENVRERSAFAAKHYNELEAAKASNEDETETSSAPKVLTHVEVQRSEQLTAARLRLPV
VAEEDNIVRTIMENAVTVICGETGSGKTTQVPQFLYETGFGSKGSLNPGMIGVTQPRRVA
AVSMAQRVASELSLPADRVSHQIRYDATVSADTAVKFMTDGVLLRELATDFLLTKYSAIM
VDEAHERSINTDVLIGVLSRVVRLREKRWLEGGADARPLRLIIMSATLRVSDFTENTTLF
PAPPPVINISARQHPVTVHFNRKTVQDYITESVNKATKIHARLPPGGILIFLTGQQEIST
VCKKLEKRFGRRAIEQKRKDRERVQGKFKYRHGDGDNDDGDADGKVAQEDGALARVKLTA
RDGDVEAEEVDLGLDRDLAADVDDGAMAEADDPDALDTDDDEASSDTRHDDDLPDELKDD
SDVPMHILPLYSLLPSEKQMRIFEEPPADTRLVVVATNVAETSLTIPNIRYVIDCGRSKE
RKYDLISGVQSYEVSWISKASASQRAGRAGRTGPGHCYRLYSSAVYEDHFRQFSSPEILR
TPVDGLVLSMKAMNIDNVANFPFPTPPDRVALKKAEQVLTHLGALDAPAVSSVSIGKNKR
KLNHAQVTELGRTMTLFPVSPRYGKMLAQGQQHGCLPYIVAMVAALSIGDPFVREQLIEE
EYGDRRRAPSSGGGDETGEDDYDRAFGKMDGDEDLDAELKNVTSSELLDKERRKARRAKY
FATMRKFEALGAGLSDTFRLLSVVGAYEYAGGSVSFCDKNFLRPKAMEEIHKLRAQLCSL
ISSTFPDLATALSNPRLAPPNETQLKVIRQLIASAYIDQVAVRADLISNESVVSSSTVNP
DERTNQMLFRLRTKGGGDRMQSTRGVPYKAMGVPGFAFIHPTSSFYHTTPPSWVVFSEVQ
RSGSKFAKTGNPEQDEGTVWLKTLTRINPVWLATLGKALCTFGKPTPVDAGGGAAGELDR
LKASVQAVKAGQVKAGEAMRDVLVTPTYAVGSENDGLAGGLGWQLPAIKAKQKFVDGRWV
LLL
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcctgtcaaggagcgatacaacgcaaaagcgcgcggttcctccgtcggcggc
tcttctcacaagaacaagcgctctttgcgtcaacgagaggccgacgcttatgattcaaac
gcacagctcatcgtccccggcagcgaggaagacctccgtcgcaaagaggcagagcagaag
cgaaagcagctgctcgaatcctcgggtcaggatgcctccgctccaatgtcgtccaagaag
cgcaaacgcctcgatgcctacatcgcctcgcgcatcaagaaggaggagagggtcaagatc
atggccaagcttgcgcagacctctgccgaggtagaccgcaccacgctcaagtcggcggcc
accctcggtactggtcgtgctaagacgatggaggaacgtatcgatacagcaggtcaaaag
acagatcgtggtggcaagcgaaggagaaagaccatgaacggcgccgctatgcagatcgaa
gaggacgacgacgacgccgatttggatgatttgcagtccacccatggtcacgatgacgat
gaggacgagggcaacttcacgccgacagaagatgtcaaagatgacgaccaagacagtgga
cccgtcggcgaggtcgaggaggatccagcacggagagccaggatcattgctgccgccagc
ctctttgacaagtccaagcctcccaccgcggcagtcgcatcatcgtcctcttcatctgca
cccgttccaggctccgctcttgcatctgctcttgggtctgccttggcaacggacgctcat
ggcaatcctatcctgccgaccatgcggaagcggaccaaaaagccgaaagcaacccgtgtc
aacgctaccacaaggcttcagcaaacccgcgagagcgattccagcttcgacagctccgac
tccgagggtgattttgactcggcatccgcttcggcatccagaccagcacccttgcaggtg
aacagagaccttatcggtccagctcctcgcgcatcactgtccaggaaaaaccaagagaaa
cggctagcacagcagactattgacatcaaaggcaaaacaaaggcagtggcatttgggcca
ggctgggatccgcaagactctgacgacgagcagcccacctctcaccccgtcaaggccgca
cacgagctcgaagcggacatggatgacgatgaagatgacgactcggacctgggctcagaa
gagccagacacagatgaatacgaagacgacatctttcttgaagctatgcgtcgccgaggt
ctgctgcaagccgaagccgaagcctcttcctctggcagttcgaacccttctacgtctgca
ccagctggtaccaaagctcttgctctttccaagtcggagcccaacggcgtggacgatggc
gatagcagcaatcaaagcgaacccgagggcgacgacgacgtcgacgatgactccaactcg
gacgaggacatggatgaagacgacgaagaggatgaagaagaggacgacgacgaagaggaa
gaagacgaagaggaagaagatgaagacaaggacgaggaagagcatacggaagaatatcga
tctcgtcgcagaggcatcggcacaaccaagcgtagctccggcttcaaggattgggctcgt
gccgcccttggcatcggcggttctgctacgaagccgaccagggacgatcttgctcagggt
acagaggccaacgacatcgaagaaggcgacacagcttacaatctcgagcctgttgccggc
ttcaaggtcaaagttggcgatatcatgcccaaggacggcgttgcgcgtggtcctctcggc
cgcgacgaggagaatgtccgggagcgttctgcctttgctgccaagcactacaatgagctc
gaggctgccaaggcctccaacgaagatgaaacagagacatcctctgcacccaaggtactc
acccacgtcgaggtgcagcgctcggaacagctcacggccgcacgtctgcgtctgccagtc
gtcgccgaggaagacaacatcgtccgcaccatcatggagaatgccgtcactgtcatctgc
ggtgagactggttcgggtaaaacaacccaggtaccgcaattcctctatgaaaccggcttc
ggttccaaaggtagtctcaacccaggcatgattggcgtgacccagcctcgacgagttgct
gctgttagcatggcacagcgcgttgcctcggagctcagcctgcctgccgaccgcgtctcg
catcagattcgatatgacgccacggtgagcgcggacaccgcggtcaaattcatgaccgac
ggtgtgctgctgcgagagctggccaccgatttcctgctgaccaagtacagcgccatcatg
gtcgatgaggcgcacgagcgcagtatcaatacggacgtgctcatcggtgtgctcagccgc
gtggttcgcctgcgtgagaagcgttggctcgagggaggcgccgacgctcggccgctgcgt
ctcatcatcatgagtgccacactccgagtgtctgactttacggaaaacacgacgttgttc
ccagcaccgcctcccgtgatcaacattagcgcacgccaacatcccgtcacggtgcatttc
aaccgcaaaacggtgcaggactacattacagagtcggtcaacaaggcgaccaagatccac
gcgcgtcttccaccgggaggcattctcatcttcctcacgggtcagcaggagatcagcacc
gtgtgcaagaagctcgagaagcggttcggccggagggcaatcgaacagaagagaaaggat
cgcgagcgcgtgcaaggcaagtttaagtatcgtcacggcgacggcgacaacgacgatggc
gatgctgatggaaaggttgctcaagaggatggtgctttggcgcgtgtcaagttgacggca
cgggatggcgatgtcgaggcggaagaggtggatctcggattggatcgtgacctcgccgct
gacgttgatgacggtgcgatggcggaggctgacgatccggatgcgctcgacacggatgac
gatgaagccagcagcgacacacgacacgacgacgatctgccggacgagctcaaagacgac
agcgatgtacccatgcacatcctccccctctactcgctgctgccctccgagaagcagatg
cgcatcttcgaagagcctcctgccgacacgcgcctcgtcgttgtagccaccaatgtcgcc
gaaacgtctctcaccatccccaacatccgctacgtgatcgattgcggacgaagcaaggaa
cgcaagtacgacctgatcagtggtgtccagtcgtacgaagtgtcgtggatcagcaaagct
tccgcgtcgcagcgcgccggtcgtgccggtcgaacaggtcccggccactgctaccgcctc
tactcttcagcggtgtacgaagaccatttcagacagttctcgagccccgagattctgcga
acaccagtcgatgggctggtgctgtcgatgaaggcgatgaacatcgacaatgtggccaac
ttcccatttccgacgcctccggaccgtgtggcgctgaagaaggcagagcaggtgcttacg
catctgggtgcactcgacgcaccggccgtgagctcggtgagcatcggcaagaacaagcgg
aagctcaaccatgcgcaggtgaccgagctgggacgaaccatgacgctgttccccgtgtcg
ccacggtacggcaagatgctcgcgcagggacagcagcacggctgtctgccgtacattgtg
gctatggtggcggcgctgagcatcggcgatccgttcgtccgcgagcagctcatcgaagaa
gaatatggcgatcgacgacgtgctccttcaagcggtggcggtgatgaaaccggtgaagac
gactacgatcgcgctttcggcaagatggatggggacgaagacctggatgccgagttaaag
aatgtcacgagcagcgagttgctggacaaagaacgacgcaaggctcgacgcgccaagtac
tttgccacaatgcgtaagttcgaagcgcttggggccgggctttcggacaccttcaggctg
ctcagtgtggtcggggcgtacgagtacgccggcggcagcgtatcattctgcgacaagaat
ttcctgcgtcccaaagcgatggaagagatccacaaactgcgtgctcaactgtgcagtctc
atctcgtcgaccttcccggatcttgcgactgctttgtcgaaccccagactggccccgcct
aacgagacacagctcaaggtgatccggcagctcatcgcgtcggcgtacatcgaccaggtg
gcggtgcgcgctgatctgatttccaacgagagcgtcgtctcgagctcgacagtgaacccg
gacgagcggaccaaccagatgctgttccggctgcgcaccaaaggtgggggtgacaggatg
cagtctacgcgtggtgtgccttacaaggcgatgggcgttcctggatttgccttcattcac
ccaacctcgtcgttctaccacacaacgcccccgtcgtgggtcgtgtttagcgaggtgcaa
cggagcggatccaaatttgccaagacaggcaatccggagcaggacgagggcacagtgtgg
ctcaagacgctgacacgcatcaacccggtgtggctggcgacgctggggaaagccctgtgc
acgttcggcaaaccgacaccggtggatgctggtggcggtgcggcaggcgagctggatcgg
ctcaaggcgagcgtgcaggcggtgaaggccgggcaggtgaaggcgggggaagcaatgcgc
gatgttctggtgacaccgacgtatgcggtgggcagcgagaatgatggtttggcgggtgga
ttgggttggcagttgccggcgatcaaggcgaagcagaagtttgtcgatggcaggtgggtg
ttactgctctaa
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integrated database retrieval system
