Sporisorium graminicola: EX895_002485
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Entry
EX895_002485 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
sgra
Sporisorium graminicola
Pathway
sgra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EX895_002485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgra03021
]
EX895_002485
03036 Chromosome and associated proteins [BR:
sgra03036
]
EX895_002485
Transcription machinery [BR:
sgra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
EX895_002485
Coactivators
SAGA/TFTC/STAGA complex
EX895_002485
Chromosome and associated proteins [BR:
sgra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
EX895_002485
STAGA complex
EX895_002485
TFTC complex
EX895_002485
SAGA complex
EX895_002485
SLIK complex
EX895_002485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_SPT8
DUF5537
Motif
Other DBs
NCBI-GeneID:
40725380
NCBI-ProteinID:
XP_029740482
UniProt:
A0A4U7KWG1
LinkDB
All DBs
Position
SGRAM_15:complement(142575..145631)
Genome browser
AA seq
1018 aa
AA seq
DB search
MPTAAAAAAALAADDKSASNDKDKPSTPAKPSDSTIHTPKDASTPLPSTSGAASSAAPAN
EASKGSVFSSPDMTAAVLAYLQRRGFDRVEAAFKAELDALASGATAEQAAAAADVLGRAP
TVGIEDLAAKNAPRTPADKDGDKDKEGADATSNKTQNAAAAADADITFAEDGDVSAAATQ
ALLLDPTDRARGFAMLKSWCQGSLDIYQPELLPILLPLFVHSFLDLVLMGQGPAASALYT
AHASSFLPTHTALLSQIRSLALPSHIQSDPLAQRFRSERYVIKMSNTVFSLLLGWLTDGG
GPVSGSANGLDEAEGPARRGREAMLKIINERCRIQVLHAQPYQIDAAVLEEGTGLTGAGP
TYSSITAGASGRSRIHSSLAKNAVSEGDALAEFNAKAAGPQLKLHPTVPLTERLENEVAK
ELQEVERREKETTAAVQADEAKNKDVEASNAATAGGAGVNQEGAEGGDVSQQQDGDTTMQ
DAAPTEAGEDEDAASRARTASVRPSEPPSSSAAGTAPPASAAEARAAAGSSGPDFSVGLL
AASITDLPPQAPTFRTVDVKREVQRIRDARKRIRLDPALLTGSAAATSAAFTSGVRDPSI
NALGEQGANAARVAALPSVCAYTFHDADDGITCSTFSDDITLMAAGFEESFVQVWSLKGE
KLRGIRGNPNLSSIRDSRTLGRQREAEGYSTRRLIGHSGPVYGVDFDPVGGSASAPRHLL
SCSADATARLWSLDTYSALVAYRGHQHPVWDVQWSPIGTYFATASADKTARLWSTERVNP
LRMYAGHLSDVDCLTFHPNSLYLATGSSDRSCRLWDVQRGACVRLFVGHQSAISCVKVSP
DGRYLASAASGNGTSAQFAGVDGVDPVSSGSHVNDVSVSLWDLASGRRIKKMWGHSERVY
SMDFSADGSLLVTGSEDCSVRCWDVRAVGGARKTPPKGSLEAQQAVATGGAGASAVPAVG
QLANAGLTAAAAAAQVGGADLASTSADCVATFHTKRTPVLDVHFTPRNLCLVAGVYED
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgctgctgctgccgccgccgccttggcagcggatgacaagtcagcatccaac
gacaaggacaagccgtccacaccagcaaagccctcggactcgacgatccacacaccgaaa
gacgcctcaacacccttgccatccacatccggcgccgcaagctcagccgcacctgccaac
gaggcttcgaaaggcagcgtgtttagcagcccggacatgacggctgccgtgcttgcctat
ctccaaagacgcggctttgatcgggtcgaggctgctttcaaggccgagcttgacgctcta
gcttctggtgcgaccgccgagcaagcggctgcagctgccgatgtgcttggtcgtgctcct
acggttggtatcgaagatcttgctgccaagaatgccccgcgtactcctgcggacaaggac
ggcgacaaggacaaggaaggagcggatgccaccagcaacaagacccagaacgcagctgca
gctgcagacgcagacatcacgttcgccgaagatggcgacgtctcggctgctgccacgcag
gcactccttctcgaccctacagaccgtgcgagaggattcgccatgctcaagtcgtggtgc
caaggaagtcttgacatttaccagcccgagctgttgcctatcttacttccgctctttgtg
cactcgttcctcgaccttgtcttgatgggccaaggtccggctgcctctgccctctacaca
gcccacgcctcctcgttcctccccacccacactgcgttgctctctcagattcgatcgctg
gcactcccatcgcacattcagtcggatccactcgcgcagcgattccgatccgaacgttac
gtcatcaaaatgtccaacaccgtctttagcctgctccttggttggctgaccgacggcggt
ggaccagtctctggctctgccaacggcttggacgaagcagaaggccccgcgaggcgcggc
agagaggccatgctcaagatcatcaacgagagatgccggatccaggtgctacacgctcag
ccgtaccagatcgacgctgccgtgctggaggaaggcacgggtctgacgggcgccggtccg
acgtactcgagcatcaccgccggtgcatccggtcgaagtcgcatccactcctccttggcc
aaaaatgcggtctcggagggagacgcactcgccgagttcaacgccaaagctgcgggtcct
cagctcaagcttcatccgacggtgccgttgaccgaaaggctggagaacgaggttgcgaag
gagctgcaggaagttgagcggcgtgaaaaggagacgaccgctgcagtgcaagcagacgaa
gccaagaacaaagatgtcgaagcctcaaacgctgctactgccggtggtgcaggtgtgaac
caagaaggtgcagagggaggcgatgtgagtcagcagcaagacggcgataccacgatgcag
gatgctgccccaactgaggccggtgaagacgaggatgctgcttcgagggcgaggacagca
tctgtgcgtccgtcggaaccgccgtcgtcgtcggccgcaggaacggctcccccagcgagt
gcggctgaagcccgagcagccgccggctcatctggtcctgacttttcggtgggactcctg
gcagccagcatcaccgaccttccacctcaagctcccaccttccgcaccgtcgacgtcaag
cgcgaggtgcaacgcatccgcgatgcacgcaaacgcattcgtctcgatccagcgctactc
accggctccgcagcggcgacctcagctgccttcacctcgggggtacgtgatcccagcatc
aacgcgctgggcgagcaaggagccaatgcagcacgtgtggctgctctgccctcggtgtgc
gcctacacgttccacgatgccgacgacggcatcacatgctcgacattttcggacgacatc
acgctcatggcggccgggttcgaagagtcattcgtccaagtctggtcgctgaagggcgag
aagctacgcgggatccggggcaatccgaacctgtcgtcaatccgcgatagtcgcacgcta
ggcaggcaaagggaggcggagggatactcgacgcggcggctgataggtcactccggcccg
gtgtacggagtcgatttcgaccctgtgggtggctcagcgagtgcgccaaggcatctgctg
agttgttcggcggacgcgaccgcgcgcctatggagcctggatacgtacagcgcgctcgtg
gcgtaccggggtcaccagcaccctgtgtgggacgtacagtggagtccgatcggcacgtac
tttgccacggcgagcgcggacaagacggcgcggctgtggagtactgagcgcgtcaacccg
ctgcgcatgtacgctggacatttgtcggatgtcgactgcctcacgttccatccgaacagt
ctgtatctggctacaggatcgtccgataggagttgtcggttgtgggacgtgcagaggggc
gcatgcgtgcggctgttcgtgggacaccagtcggcgatatcctgcgtcaaggtgagcccc
gatgggcggtaccttgcgtccgcggcgagcggcaatggaacgtcggcgcaatttgcgggc
gttgatggcgtggatccggtatcgagtgggtcgcatgtcaacgacgtgagtgtgtcgttg
tgggacctggcgagtggaaggaggatcaagaagatgtggggccacagcgagcgcgtgtat
tccatggacttctccgcggacgggtcgctgctcgtcacgggcagtgaggactgtagtgta
aggtgctgggacgtgcgcgcggtgggtggcgcgagaaagacgccgccaaaagggtcattg
gaggctcaacaagctgtggcgacaggaggagcgggagcatcagctgtgccggcggtggga
cagttggcaaatgccgggttgacagcagctgccgcggcggcccaggtcggtggcgcggat
ctggccagcacgagcgccgattgcgtcgctacgttccataccaagaggacgcccgtgctg
gacgttcacttcacgcccaggaacctgtgtctcgtagcaggcgtctacgaggattga
DBGET
integrated database retrieval system
