Sporisorium graminicola: EX895_002677
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Entry
EX895_002677 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sgra
Sporisorium graminicola
Pathway
sgra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EX895_002677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgra03041
]
EX895_002677
Spliceosome [BR:
sgra03041
]
Common components
Common spliceosomal components
SR proteins
EX895_002677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
40725572
NCBI-ProteinID:
XP_029740310
UniProt:
A0A4U7KUL0
LinkDB
All DBs
Position
SGRAM_16:join(169069..169149,169237..169950)
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AA seq
264 aa
AA seq
DB search
MSTRVYVGKLAPDVRRGDIEDLFRDYGRLHDVRIMGSFGFVEFEHPRDAEDAVKDFDGKN
FMGERIVVQHAKSGERRREPAGHGPDAFDRRGGSSYGRDAPSSRYGAPPPPRREPRIRRG
QFRCVISNLPPNTSWQDLKDIGREHGSISFADVDHNNPDEGFIEYDNRDDYERALDKIEG
IELRGNKLRIDPAPAPAPAPRDERDRSPPPRRRDDSPPARRRDDSREPRDRQDSREPVPE
RNGRYDSRSPPRDHDDDVPRPRDD
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcgagtttacgtaggcaaacttgctcccgacgtccgtcgtggcgacatcgag
gatctcttccgtgactacggccgcctgcacgatgtccgcattatgggctcgttcggtttt
gtcgagttcgagcaccctcgtgatgccgaagatgccgtcaaggatttcgacggcaagaac
ttcatgggcgagcgaatcgtagtccagcacgcaaagagcggtgagcgtcgtcgtgagcct
gccggccacggtcctgacgctttcgaccgtcgtggcggcagcagctatggcagggatgct
ccctcgtcccgctatggtgctccccctcctcctcgccgtgaacctcgtatccgccgcggc
cagttccgttgtgtcatttccaacctccctcccaacaccagctggcaggatctcaaggac
attggtcgtgagcacggctccatctctttcgccgatgtcgaccacaacaatcccgacgag
ggcttcatcgagtacgacaaccgtgacgactacgagcgcgctctcgacaagatcgagggt
atcgagctccgtggcaacaagctccgaatcgatcctgctcctgctcctgctcctgctccc
cgcgacgagcgcgaccgtagccctcctccccgccgtcgcgatgacagccctcctgctcgt
cgacgtgacgacagccgtgagcctcgtgaccgccaagatagccgcgaacctgtccccgag
cgtaacggacgctacgacagtcgaagccctcctcgtgaccacgacgatgatgtccctcgt
cctcgcgacgattga
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