Sporisorium graminicola: EX895_002844
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Entry
EX895_002844 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K03257
translation initiation factor 4A
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_002844
03012 Translation factors [BR:
sgra03012
]
EX895_002844
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgra04147
]
EX895_002844
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
EX895_002844
mRNA cycle factors
Stress granule specific factors
EX895_002844
Translation factors [BR:
sgra03012
]
Eukaryotic type
Initiation factors
eIF-4
EX895_002844
Exosome [BR:
sgra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EX895_002844
Exosomal proteins of bladder cancer cells
EX895_002844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_30
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
40725739
NCBI-ProteinID:
XP_029740119
UniProt:
A0A4U7KU55
LinkDB
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Position
SGRAM_18:join(116284..116291,116673..117897)
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AA seq
410 aa
AA seq
DB search
MSKPEETTAAAAPAGEAGNNLNISDAEIESNWETVIDNFDNMELKDELLRGVYAYGFERP
SAIQARAIVPVIKGHDVIAQAQSGTGKTATFSIAILQRIDPSIKAVQALILAPTRELAQQ
IQKVVIALGDYMKIDCHACIGGTNVREDMAKLNEGAQVVVGTPGRVYDMINRRAFKTDQL
KMFCLDEADEMLSRGFKDQMYEVFQLLPQDTQVVLLSATMPQEVLEVTKKFMREPIRILV
KRDELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTITQAVIFCNTRRKVDWLTDKLTSRE
FTVSAMHGDMEQGQREVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENY
IHRIGRGGRFGRKGVAINFVTSDDVRMLRDIEQFYSTQIDEMPLNVADLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcccgaggagaccaccgccgccgccgcccctgctggcgaggctggcaacaac
ctcaacatttccgatgccgagatcgagtccaactgggagaccgtcattgacaacttcgac
aacatggagctcaaggatgagctcctccgtggtgtctatgcctacggtttcgagcgtccc
tcggccatccaggcccgcgccatcgtccccgtcatcaagggccacgacgtcattgcccag
gctcagtccggtaccggcaagaccgccaccttctccatcgccattctccagcgcatcgac
cccagcatcaaggccgtccaggccctcatccttgctcccacccgtgagctcgcccagcag
atccagaaggtcgtcatcgccctcggcgactacatgaagattgactgccacgcctgcatc
ggtggcaccaacgttcgcgaggacatggccaagctcaacgagggcgcccaggtcgtcgtc
ggtacccccggtcgtgtctacgacatgatcaaccgtcgtgccttcaagaccgatcagctc
aagatgttctgcctcgacgaggccgacgagatgctctcgcgtggtttcaaggaccagatg
tacgaggtcttccagctcttgcctcaggacacccaggtcgtcctcctctcggccaccatg
ccccaggaggtgctcgaggtcaccaagaagttcatgcgtgagcccattcgcatccttgtc
aagcgcgacgagctgaccctcgaaggtatcaagcagttctacgttgccgtcgagaaggag
gagtggaagctcgacactctttgcgatctctacgagaccgtcaccatcacccaggccgtc
atcttctgcaacacccgcagaaaggtcgactggctcaccgacaagctcacctcgcgtgag
ttcaccgtgtcggccatgcacggcgacatggagcagggccagcgtgaggtcatcatgcgc
gagttccgctccggctcctcgcgtgtcctgatcaccaccgacctgctcgcccgtggtatc
gacgtccagcaggtctcgctcgtcatcaactatgacttgccctccaaccgtgaaaactac
atccaccgtatcggccgtggcggtcgtttcggccgtaagggtgttgccatcaactttgtc
acctcggacgacgtccgcatgctccgtgacatcgagcagttctactctacccagatcgac
gagatgcccctcaacgtcgctgacctcatctaa
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