KEGG   Sporisorium graminicola: EX895_003169
Entry
EX895_003169      CDS       T09331                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
sgra  Sporisorium graminicola
Pathway
sgra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sgra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EX895_003169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sgra03041]
    EX895_003169
Spliceosome [BR:sgra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    EX895_003169
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st PRP4 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_EIPR1 WD40_like Beta-prop_DCAF12 WD_LRWD1 Beta-prop_WDR75_2nd WDR54 eIF2A Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 40726064
NCBI-ProteinID: XP_029740058
UniProt: A0A4U7KU85
LinkDB
Position
SGRAM_19:complement(628135..629649)
AA seq 504 aa
MVASRDSMDLDVASTSGVTIEDLLSSRSNAYSATDAALSAQLDQRKLARSLAIPTSDPKV
RLRLRQLGEPITCFGEREMDRRERLRQLLARQLQQQPSSTSTPHDSQQNSDSDSAEGGDD
DQEDEEFYTEGSPAVVDARRKMACFSLQRAKRRLAVQRRDAAVPLASIVKLRSKVFEPIK
AYTNLGSQIGDDRPVSMTRFAPSSQLLATGSWSGSIKLWQVPSANHKSTLRAHTDKVGGL
AWHPQATLTQDAAAVNLVSGAGDASVCLWSLDSDRPLATLQGHEARVARTAFHPTGDYVA
SASFDGTWRLWDVASSQCLTVQEGHSKEVYAVEFQDDGALVASGGLDAIGRVWDTRTGRS
AMVLDGHAKEILSIDFAPNGYQLATASGDDTVRIWDMRALKSIYTIPAHKSSVSDVRFFR
SLSHRTSPFAPQDGEEQHEISRNGLYLATSGYDGMVRIWSADDWQLLRTLSGDGGRVMSV
DISSDGEMLVSGEWGRTFKLWGSL
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggtggcgtcgcgcgacagtatggatctcgacgttgcctcgacgtcaggcgtcaccatc
gaagacttgctctcgtcacgctccaacgcatattctgccactgatgccgccttgtccgct
caactcgatcagcgcaagctggccaggagccttgccatccccacctcggaccccaaagtg
aggttacgattgcgacaactcggcgaacccatcacttgctttggcgaacgcgagatggat
cgtcgtgaacgtcttcgtcagctgcttgcccgacaactgcagcagcagccttcatcgacc
tcaactccacacgactcacagcaaaacagcgatagcgattcagcagaaggcggcgacgac
gaccaggaagacgaagagttctacaccgaaggctcacccgctgtcgttgatgcacgccgc
aagatggcttgcttttcactccagcgtgccaaacgcagacttgcagtacaacgccgagac
gccgccgtcccactcgcctcgatcgtcaaattgcgctccaaagtgtttgagcccatcaag
gcctacaccaacctcggctctcagattggcgacgaccgtcccgtatcaatgacgcggttc
gcacccagctcgcaactgctcgcaacaggcagttggtccggcagcatcaagctctggcag
gtgcccagtgctaaccacaagagtacgctgcgagcgcatacagacaaagtggggggctta
gcatggcatccgcaggcgaccttgactcaagatgctgcggctgtcaaccttgtctctgga
gctggggatgcttctgtctgcctgtggagcctcgacagcgatcggcccttggctacgttg
caaggccacgaggcgcgtgtagcacgaacggcgttccatccaacgggcgactacgtggca
agtgcctcgtttgacggcacgtggcggctgtgggatgtcgccagctctcaatgcctcact
gttcaagaagggcacagcaaggaagtttacgcggtcgagtttcaagacgacggtgcactc
gtagccagtggtgggctcgacgctatcggtagagtgtgggacacgcgcacgggcagatca
gccatggtgctcgacggtcacgccaaggagattctctcgatcgactttgcgcccaacggc
taccagcttgccactgccagcggcgacgataccgtgaggatatgggacatgcgcgcgctc
aaatccatctacaccatccctgcgcacaagtcgtccgtttccgacgttcggttcttccgc
tctctctcgcatcgcacgtcgccatttgcgccgcaagacggagaggaacaacacgagatc
agtcgaaatggcctctacctcgccacctcgggctacgatggcatggtgaggatctggtcc
gccgatgactggcagctgttgcgcacgctcagtggagacggtggaagggtcatgagcgtc
gatatcagctctgatggcgagatgctcgtgagtggcgaatgggggaggacgttcaagctc
tggggttcgttgtga

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