Sporisorium graminicola: EX895_003275
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Entry
EX895_003275 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K03145
transcription elongation factor S-II
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgra03021
]
EX895_003275
Transcription machinery [BR:
sgra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
EX895_003275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
TFIIS_C
Med26
HTH_22
zinc_ribbon_4
Motif
Other DBs
NCBI-GeneID:
40726170
NCBI-ProteinID:
XP_029739679
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Position
SGRAM_20:257802..258764
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AA seq
320 aa
AA seq
DB search
MATKDLSLDELKDLQKQLSKLATSSDSEAIQSIFGQLRTGLSVPTEDIIRQSKIGVAVGK
LRSHSDKKVADQAKSLVKDWKSIVDKQRAQQQSSANSSKTPSSTASPAPTASKADGAANG
NGTAEASPSSTPSATAATKPASSNTKIDFEILNDKVRNACLKLLYNSLEIGKESHGWNDS
QIFDAAVAVEAAILSNQGKGSVTADYRNKVRSLSLNIKDKSNPDLRVRVVEHHIPADTLV
TMTNEELASDKRKREIEELQMQNLFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSA
DEPMTTFVTCTNCNHKWKFC
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaaagatctctcgctagacgagctcaaggacctgcaaaagcagctgtctaag
ctggctacctcctcggactcggaagccatccagtccatctttggtcagctcaggacgggg
ttgtcggtaccaacagaagacatcatccgtcagagcaagatcggtgtagcggtgggcaag
ttgcgctcgcattcggacaagaaggtagcggaccaggcaaagtcgttggtcaaggactgg
aagtcgatcgtagacaagcaaagggcgcaacagcaatcgtctgcaaacagcagcaagacg
ccttcgtcaactgcttcgcctgcgccgacagcgtccaaagcggatggcgcggccaacggc
aatgggacagcagaggcatcgccatcatcgacgccgtcagcaacagcagccaccaaacca
gcatcttccaacacgaaaatcgactttgagatccttaacgacaaggtgcgcaacgcatgt
ctcaagctgctctacaactcgctcgagatcggcaaagagtcgcacggctggaacgactct
cagatctttgacgccgccgtcgccgtggaagccgcgattctctcgaaccagggcaaaggc
tctgtcacggccgactaccgcaacaaggtgcgcagcttatcgctcaacatcaaggacaag
agcaacccagatctgcgtgtgcgcgtcgtagaacaccatattcccgccgacacgctcgtc
accatgaccaacgaagagctagcgagcgacaagagaaaacgagagatcgaagagctgcag
atgcagaacctgttcaaggccaaaggtgctgccgcccaggaggctgagaccgacgctttc
cagtgcggaaggtgcaagcagaggaagacgcggtactaccagatgcagacacgatcggct
gacgagcctatgacgacgtttgtcacgtgtaccaattgcaaccacaagtggaagttttgt
tga
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