Sporisorium graminicola: EX895_003421
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Entry
EX895_003421 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgra03041
]
EX895_003421
Enzymes [BR:
sgra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EX895_003421
Spliceosome [BR:
sgra03041
]
Complex C
Other components
Complex C specific factors
EX895_003421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
HA2_C
OB_NTP_bind
DEAD
AAA_22
Cas3-like_C_2
nSTAND3
AAA_23
ABC_tran
T2SSE
ATPase
HA2_N
Rad17
AAA_11
AAA_19
AAA_14
Roc
Motif
Other DBs
NCBI-GeneID:
40726316
NCBI-ProteinID:
XP_029739825
UniProt:
A0A4U7KTL8
LinkDB
All DBs
Position
SGRAM_20:complement(join(713269..713325,713409..715400))
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AA seq
682 aa
AA seq
DB search
MSTSTAGPVFWKPGSARPGSSLDRSSESAPLITSLPPLSPSSSGQLPIHAQRLTILHALE
AQQILIIVGETGCGKTTQLPQFLYNAGWASSPSTTGIIACTQPRRVAASTIAARVSAELG
TKLGQEIGYTIRFEDNSDPRTTRIRYMTDGALFRECVRDPLLTRYSVVMVDDAHEREVYT
DLLLGVLAKICKKRREFRVVVSSATIDALLFKDFFEAEGVSSAVLRLQGGRSFPVHTAFL
EEPCADYVQQTIDTIWNIHLSEPKGDILAFLTGREEIEYALQQLSDRQADLPGSAARMHL
LPLHAGLSATEQVEIFAPAPTRDTRKVVVATNIAEASITLDGIVYVVDCGFVKVRTSHAA
AGSKTGGGIDSLSVQPISRASAIQRAGRAGRTRAGKCFRLYTEASFQQLRATTAPELHRV
DLSSTILMLKLLGIDNLVKFDWVPPAPAPEALAAGLQKLVQLGALDDHARLTESGGWMGE
LPLAPHWARILLASAEPRHACASEILSIIAMLQVTHPFFDPQSAQTQLSVRGFAAQQGDM
YTLLNVYLAFTAERGRSAKWCARHRLNFSALSRAVNIRAQLEKFLLRFAAATTSSSLDPR
SSILGKQDAVERITKCLLTGLYPNLARYDESSMTYTTALSNTVVNVHPTSLFFNRRPDAG
KMWVLGHGGCAWRVQGGYAVGW
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctcgacagctggaccagtcttctggaagccaggctcggcacggcccggtagc
tctctcgatcggtcgtccgaatctgcacccctcatcacatctctccctccgctatctcca
tcttcttccggccaactacccatccatgcacagcgactcaccatcctgcacgcactcgaa
gcccaacagattctcatcatcgttggcgagaccggctgcggcaagaccacccaactgccc
caattcctctacaacgccggctgggcctcctccccttccacaaccggcatcatcgcatgc
acgcagcctcgtcgcgtcgcagcctccaccatcgccgcccgcgtatccgccgagctcggc
accaaacttggccaggagatcggctacacgatccggttcgaagacaactcggatccgcgc
actacgaggattcggtacatgacggacggtgccttgtttcgcgagtgtgtgcgcgacccg
ctgctgacgcgctacagtgtcgtgatggtcgatgacgcgcatgagagagaagtgtacacg
gatctgttgttaggcgtgctggcgaaaatttgcaagaagaggcgcgagttcagggtggtc
gtgtcgagtgcgacgatcgatgcgctgctgttcaaggatttctttgaggcggagggagtg
agttcagcagtgctgaggctgcaaggcgggcggtcatttccagtccatacggcgtttttg
gaggaaccatgcgcagactacgtacagcagacgatcgatactatctggaacatccacctc
agcgaacccaagggggatatactcgcatttctcaccggtcgagaagagatcgaatacgcc
cttcagcagctgtcggatcgacaagccgacttgcctggatctgcggcacggatgcatctg
ctgccgctgcatgcgggactctcagccacggagcaggtcgagatctttgctcccgccccc
acgcgggatacacgcaaggtggtggttgcgactaacatcgccgaagcttccatcacgcta
gacgggatagtgtacgtggtcgattgtggattcgtcaaagtgcgcacctcgcacgctgcc
gccggaagcaagacgggaggagggatagactcgctaagcgtacagcccatcagccgggca
tctgcgatccaacgtgccgggcgagcgggtcgtactcgagcaggcaaatgtttccgcttg
tacactgaagcgtcgttccagcaactgcgcgccaccaccgctcctgagctgcacagagtc
gacctgtcgagtacgattctgatgctcaagctgctggggatcgataacctggtcaagttc
gactgggtgcctcctgcgccggcgcccgaagcgcttgccgcgggcctgcagaagctggtg
cagctcggggcgctggacgaccacgctcgtctaaccgagagcggggggtggatgggcgag
ctgccgctagcgccgcactgggcgcgcatcctccttgcctccgccgaaccgcgccatgcg
tgtgccagcgagattttgagcatcatcgcaatgctgcaagtcacgcatcccttcttcgac
ccgcagtcggcgcagacccagctgagcgttcgagggttcgccgcacagcaaggagacatg
tatacactgctcaacgtgtacctcgccttcactgccgagcgtggacgcagcgccaaatgg
tgtgcccgccacagactcaacttctccgcactcagccgtgccgtcaacatccgcgcacag
ctcgaaaagttcctcctccgcttcgctgccgccacgacctcgtcgtcactagatccacga
tcctcgattctgggcaagcaagatgcagtggaacgtatcaccaaatgcctgctcacaggg
ctgtacccgaatctagcgaggtacgacgagtcttccatgacgtacaccactgctttgagc
aacacggtcgtaaacgtgcacccgacgagcttgttcttcaatcgccgcccggatgccggc
aagatgtgggtcttgggtcacggaggctgtgcctggcgtgtacagggtggatacgcggtg
gggtggtga
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integrated database retrieval system
