Sporisorium graminicola: EX895_003606
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Entry
EX895_003606 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
sgra
Sporisorium graminicola
Pathway
sgra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EX895_003606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_003606
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
EX895_003606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
40726501
NCBI-ProteinID:
XP_029739577
UniProt:
A0A4U7KXN1
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All DBs
Position
SGRAM_21:complement(406737..409688)
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AA seq
983 aa
AA seq
DB search
MLASTGKSSGSSKPSTSKSASATEAAVATSSSASSSTSTPEPASSSLPDPKADLSAYLLK
LQSALQPLTRNAAAIPTHGDLAFHRSMDRKLAKKLDSESDRVLQSISQLASWIASDSRAP
KIPLAKTDASGSKKQKASVAVDLDFTDVITKESFTSNLGELVDHLLESADTCLDEYTGKL
APRKVGASADDAAANAGETGTTSRLQAMTAVQNGKALPKTGNLPSWVLNAPISPPQKHFT
TKPDNSASTLWQPTLKYGKPNAQVALGHVNPPRIGADGQPLPRGPRRGMYCAEGDPLDNP
YYHEIAHSSPPTHALSKPDAAAKDHPPPPLNEKEPSLSTDACPFQWVSTKAQIEQLRDHL
DEPRVLEIAIDLEHHSYRTYQGIVCLMQLSTRWGDWIIDTLSDEVREHAELLNSAFTDPN
KVKVLHGANHDVLWLQRDLGLYLVNLFDTYHATNVLMFPSHGLNYLMARYCSFDADKRYQ
LADWRIRPLPKEMLYYARSDTHTLLYIYDNLRHELMESGGVDAIRQVFERSKDVAMSTYA
KEEWDSEGETREGWRSVWRKWGGEAALGTEDRKEVRQMKKEERLVRALHRWRDSVAREED
ESPRYVLGANNLMMLAARAPTSKEGVLACIPPNASGLKKRIDELVKLIATELQEWEKDQE
AKKESLSAALLKESKEDEMDVGEAVARDSLQQERAVSHSISAISHVAATLPHVDPSIWSS
AADSTGTAAPSAASRTGMRGAVRSFASNLFGRSTPPTPSSSAAAAKPSLNSTMSKLFGTL
SGNKPTSTPAAAKIDAVKAGFIDAVGALVGSTTTTGADVDVPVQDAFLPQNQADPTTPSP
AVETVTSQRAADTDDDASEKEDFIVVSTTASKKKSKPASQQGDSKKDKKKRKAADAAAAS
SSPAAPKPKREKFSAEFDFSSTPDAFTSAPPVKDGAKNEGGGRKQGHRKQEGKKEGKKEK
GDESIFRQPRDRARRKTGMGSTM
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgctggcatcaacagggaagagctcgggctcgtccaagccatccacctccaagtctgct
tccgccactgaggctgcggtggccacctcttcttctgcctcgtcatccacatcgacgccg
gagccagctagctcgtctcttccggaccccaaagctgacttgagtgcatatctgctcaag
ctgcaatcggccctccaaccgctcacacgcaatgcggcagccatccccacgcacggcgac
ctcgccttccaccgcagcatggaccgcaaactcgcaaagaagctcgattcggaatcggac
cgtgtgctgcaatccatatcgcagctcgcaagctggattgccagcgactcgcgcgcgccc
aagattccgcttgccaaaaccgatgcttccggctccaagaagcaaaaagcaagcgtcgct
gtggatttggatttcacagatgttatcaccaaggaaagcttcacttcgaatttgggcgag
ctggttgaccatcttctggagagtgccgacacttgtctcgacgaatacacgggcaagctc
gcacctcgcaaagtgggagcatctgctgacgacgccgctgccaacgctggcgagacgggc
accacttcgaggttgcaagccatgacagctgtgcagaacggcaaggcgttgcccaagacc
ggaaacctgccttcgtgggtactgaatgcgcccatctcaccaccgcagaagcatttcacc
accaaacccgacaactctgcctcgacgctgtggcagcctacgctcaagtacggcaagccc
aacgcacaggttgcgctcggacacgtcaatccgccacgcatcggcgctgatggccaaccg
cttccacgtggtcccaggaggggaatgtactgcgcggaaggcgacccgctcgacaacccg
tactaccacgaaatcgcacactcctcaccaccgacccacgcgctctccaaaccagacgcg
gcagccaaagaccaccccccgccgccgctcaacgaaaaggagccgtccctctccaccgac
gcatgccccttccagtgggtgtcgaccaaagcacagatcgagcagctgcgcgaccacctc
gacgagccgcgcgtcctcgagatcgccatcgatctggagcatcactcgtaccgcacttac
cagggaattgtgtgtctcatgcagctctcgacacgctggggcgactggatcatcgacacg
ctctcggacgaggtgcgcgagcacgccgagctgctcaactctgccttcacggaccccaac
aaggtcaaggtgctgcacggcgccaaccacgacgtgctctggctgcagcgcgacctgggc
ttgtatctggtcaacctgttcgacacataccatgcgaccaacgtgctcatgttccccagc
cacgggctcaactacctcatggcgcgctactgcagcttcgacgccgataagcgctaccag
ctcgcagattggcgcatccgccccctgcccaaggagatgctctactacgcccgcagcgac
acccacacgctgctgtacatctacgacaatcttcggcacgagctcatggagtccgggggc
gtcgatgcgatacgccaggtgttcgagcgcagcaaggatgtcgcgatgtcgacgtacgcg
aaggaagagtgggacagcgaaggcgagacacgcgaaggatggcgcagcgtgtggcgcaaa
tggggtggtgaggctgctctgggcaccgaggataggaaggaggtgcgacaaatgaagaag
gaggagcggctggtccgggcactgcacaggtggagggacagtgtggcgagagaggaggac
gagtcgcccaggtacgtgctgggtgcgaacaacctgatgatgttggcggctagggcgccg
accagcaaagagggagtactggcatgtatccctcccaatgcgtccgggttgaagaagcgg
atcgatgagctggtcaaactgatcgctacagagttgcaagagtgggaaaaagatcaagag
gcaaagaaggagagtttgtcggcagcgctgttgaaggagagcaaggaagacgagatggat
gttggcgaagctgttgcacgcgattctctgcagcaggagcgagccgtgtcgcactcgatc
tcagccatcagtcacgtcgcagccacccttccgcacgtcgacccttccatctggtcctcc
gccgccgactccactgggaccgctgccccctccgctgcttcgcgaaccggcatgcgtggc
gcagtgcgatccttcgcatccaacttgtttggtcgatccaccccacccactccttcttct
tctgctgctgctgcaaagccaagcctgaactcgaccatgtccaagctcttcggcacgcta
tctggcaacaagcccacctccacgcctgctgcagccaaaatcgacgcggtcaaggccggc
ttcatcgacgcagttggcgcactcgtcggcagcaccaccaccaccggagccgacgtcgat
gtacccgtgcaggatgctttcctcccacagaaccaggccgatcccaccacgccttccccc
gctgtggagaccgtcacctcgcagcgcgcagcagacacagacgacgacgcgtccgaaaag
gaagactttatcgtcgtctccaccacggcctcgaagaaaaagtccaagcccgcctcccag
cagggcgactcaaagaaggacaagaagaaacgcaaagccgccgacgccgccgccgcttcc
tcttccccagcagcgccgaagccgaagagggagaagttctcggccgagtttgacttctcg
tctactcccgatgcgttcacgtctgcccccccggtgaaagacggagcgaagaatgaaggt
ggcggcaggaagcaaggccacaggaagcaggaggggaagaaggaggggaagaaggagaag
ggagatgaaagcatattcagacagcctcgggatcgtgccagacgcaagacaggtatggga
agcaccatgtaa
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