KEGG   Sporisorium graminicola: EX895_003606
Entry
EX895_003606      CDS       T09331                                 
Name
(RefSeq) hypothetical protein
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
sgra  Sporisorium graminicola
Pathway
sgra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sgra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EX895_003606
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgra03019]
    EX895_003606
Messenger RNA biogenesis [BR:sgra03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     EX895_003606
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 40726501
NCBI-ProteinID: XP_029739577
UniProt: A0A4U7KXN1
LinkDB
Position
SGRAM_21:complement(406737..409688)
AA seq 983 aa
MLASTGKSSGSSKPSTSKSASATEAAVATSSSASSSTSTPEPASSSLPDPKADLSAYLLK
LQSALQPLTRNAAAIPTHGDLAFHRSMDRKLAKKLDSESDRVLQSISQLASWIASDSRAP
KIPLAKTDASGSKKQKASVAVDLDFTDVITKESFTSNLGELVDHLLESADTCLDEYTGKL
APRKVGASADDAAANAGETGTTSRLQAMTAVQNGKALPKTGNLPSWVLNAPISPPQKHFT
TKPDNSASTLWQPTLKYGKPNAQVALGHVNPPRIGADGQPLPRGPRRGMYCAEGDPLDNP
YYHEIAHSSPPTHALSKPDAAAKDHPPPPLNEKEPSLSTDACPFQWVSTKAQIEQLRDHL
DEPRVLEIAIDLEHHSYRTYQGIVCLMQLSTRWGDWIIDTLSDEVREHAELLNSAFTDPN
KVKVLHGANHDVLWLQRDLGLYLVNLFDTYHATNVLMFPSHGLNYLMARYCSFDADKRYQ
LADWRIRPLPKEMLYYARSDTHTLLYIYDNLRHELMESGGVDAIRQVFERSKDVAMSTYA
KEEWDSEGETREGWRSVWRKWGGEAALGTEDRKEVRQMKKEERLVRALHRWRDSVAREED
ESPRYVLGANNLMMLAARAPTSKEGVLACIPPNASGLKKRIDELVKLIATELQEWEKDQE
AKKESLSAALLKESKEDEMDVGEAVARDSLQQERAVSHSISAISHVAATLPHVDPSIWSS
AADSTGTAAPSAASRTGMRGAVRSFASNLFGRSTPPTPSSSAAAAKPSLNSTMSKLFGTL
SGNKPTSTPAAAKIDAVKAGFIDAVGALVGSTTTTGADVDVPVQDAFLPQNQADPTTPSP
AVETVTSQRAADTDDDASEKEDFIVVSTTASKKKSKPASQQGDSKKDKKKRKAADAAAAS
SSPAAPKPKREKFSAEFDFSSTPDAFTSAPPVKDGAKNEGGGRKQGHRKQEGKKEGKKEK
GDESIFRQPRDRARRKTGMGSTM
NT seq 2952 nt   +upstreamnt  +downstreamnt
atgctggcatcaacagggaagagctcgggctcgtccaagccatccacctccaagtctgct
tccgccactgaggctgcggtggccacctcttcttctgcctcgtcatccacatcgacgccg
gagccagctagctcgtctcttccggaccccaaagctgacttgagtgcatatctgctcaag
ctgcaatcggccctccaaccgctcacacgcaatgcggcagccatccccacgcacggcgac
ctcgccttccaccgcagcatggaccgcaaactcgcaaagaagctcgattcggaatcggac
cgtgtgctgcaatccatatcgcagctcgcaagctggattgccagcgactcgcgcgcgccc
aagattccgcttgccaaaaccgatgcttccggctccaagaagcaaaaagcaagcgtcgct
gtggatttggatttcacagatgttatcaccaaggaaagcttcacttcgaatttgggcgag
ctggttgaccatcttctggagagtgccgacacttgtctcgacgaatacacgggcaagctc
gcacctcgcaaagtgggagcatctgctgacgacgccgctgccaacgctggcgagacgggc
accacttcgaggttgcaagccatgacagctgtgcagaacggcaaggcgttgcccaagacc
ggaaacctgccttcgtgggtactgaatgcgcccatctcaccaccgcagaagcatttcacc
accaaacccgacaactctgcctcgacgctgtggcagcctacgctcaagtacggcaagccc
aacgcacaggttgcgctcggacacgtcaatccgccacgcatcggcgctgatggccaaccg
cttccacgtggtcccaggaggggaatgtactgcgcggaaggcgacccgctcgacaacccg
tactaccacgaaatcgcacactcctcaccaccgacccacgcgctctccaaaccagacgcg
gcagccaaagaccaccccccgccgccgctcaacgaaaaggagccgtccctctccaccgac
gcatgccccttccagtgggtgtcgaccaaagcacagatcgagcagctgcgcgaccacctc
gacgagccgcgcgtcctcgagatcgccatcgatctggagcatcactcgtaccgcacttac
cagggaattgtgtgtctcatgcagctctcgacacgctggggcgactggatcatcgacacg
ctctcggacgaggtgcgcgagcacgccgagctgctcaactctgccttcacggaccccaac
aaggtcaaggtgctgcacggcgccaaccacgacgtgctctggctgcagcgcgacctgggc
ttgtatctggtcaacctgttcgacacataccatgcgaccaacgtgctcatgttccccagc
cacgggctcaactacctcatggcgcgctactgcagcttcgacgccgataagcgctaccag
ctcgcagattggcgcatccgccccctgcccaaggagatgctctactacgcccgcagcgac
acccacacgctgctgtacatctacgacaatcttcggcacgagctcatggagtccgggggc
gtcgatgcgatacgccaggtgttcgagcgcagcaaggatgtcgcgatgtcgacgtacgcg
aaggaagagtgggacagcgaaggcgagacacgcgaaggatggcgcagcgtgtggcgcaaa
tggggtggtgaggctgctctgggcaccgaggataggaaggaggtgcgacaaatgaagaag
gaggagcggctggtccgggcactgcacaggtggagggacagtgtggcgagagaggaggac
gagtcgcccaggtacgtgctgggtgcgaacaacctgatgatgttggcggctagggcgccg
accagcaaagagggagtactggcatgtatccctcccaatgcgtccgggttgaagaagcgg
atcgatgagctggtcaaactgatcgctacagagttgcaagagtgggaaaaagatcaagag
gcaaagaaggagagtttgtcggcagcgctgttgaaggagagcaaggaagacgagatggat
gttggcgaagctgttgcacgcgattctctgcagcaggagcgagccgtgtcgcactcgatc
tcagccatcagtcacgtcgcagccacccttccgcacgtcgacccttccatctggtcctcc
gccgccgactccactgggaccgctgccccctccgctgcttcgcgaaccggcatgcgtggc
gcagtgcgatccttcgcatccaacttgtttggtcgatccaccccacccactccttcttct
tctgctgctgctgcaaagccaagcctgaactcgaccatgtccaagctcttcggcacgcta
tctggcaacaagcccacctccacgcctgctgcagccaaaatcgacgcggtcaaggccggc
ttcatcgacgcagttggcgcactcgtcggcagcaccaccaccaccggagccgacgtcgat
gtacccgtgcaggatgctttcctcccacagaaccaggccgatcccaccacgccttccccc
gctgtggagaccgtcacctcgcagcgcgcagcagacacagacgacgacgcgtccgaaaag
gaagactttatcgtcgtctccaccacggcctcgaagaaaaagtccaagcccgcctcccag
cagggcgactcaaagaaggacaagaagaaacgcaaagccgccgacgccgccgccgcttcc
tcttccccagcagcgccgaagccgaagagggagaagttctcggccgagtttgacttctcg
tctactcccgatgcgttcacgtctgcccccccggtgaaagacggagcgaagaatgaaggt
ggcggcaggaagcaaggccacaggaagcaggaggggaagaaggaggggaagaaggagaag
ggagatgaaagcatattcagacagcctcgggatcgtgccagacgcaagacaggtatggga
agcaccatgtaa

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