Sporisorium graminicola: EX895_003693
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Entry
EX895_003693 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
sgra
Sporisorium graminicola
Pathway
sgra03013
Nucleocytoplasmic transport
sgra03015
mRNA surveillance pathway
sgra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EX895_003693
09122 Translation
03013 Nucleocytoplasmic transport
EX895_003693
03015 mRNA surveillance pathway
EX895_003693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_003693
03041 Spliceosome [BR:
sgra03041
]
EX895_003693
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
EX895_003693
Spliceosome [BR:
sgra03041
]
Common components
Common spliceosomal components
Cap binding complex
EX895_003693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
Peptidase_C65
Motif
Other DBs
NCBI-GeneID:
40726588
NCBI-ProteinID:
XP_029739001
UniProt:
A0A4U7KSH7
LinkDB
All DBs
Position
SGRAM_22:complement(204507..207551)
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AA seq
1014 aa
AA seq
DB search
MDGWDTSSNTGSGYSGQHQQSYDNNNGGYGGGGGRGGGGGGYGARDQGWANSPRRGGRGG
YRGGGGGGGGAYHHHQQQQQQQSVEQREENRIRYIRSQLFKLGEEKDFHPPSDLLKMARW
IEDKSRDGVQPITAAFRVMVTEQPHKTPLIAALIGFLCLSHQSKPPTAAAAAAARSEAGV
EEEDLPSTEVNADEPDSLGITIVKDLVKAFRSYLDARLWRNTRLSLNLFAALVPLHIIPA
SSLRTLLASFAAVLDEPAVAAARADRAAICIIETLCRAGQDLLAGGDAAQAELDDLVHKV
VTYDAARKVEVQLTQPVHDLDSIWLEGFPDAVKALEELRARGYTRPRFLPVPSDLLPAAI
SPSATQVPEEKRTVSLPDVLVPPEEDAEDQGLDVAYAQLGQHQVKRRKIDTGKGELEEKK
AAVGPQRVSLQPRWFSNTVPAVASPASVVLRAIVADMIDLYEVNRKEAAKLLLDLPNWLR
RGTFVGAKISTEAGLFGEMDDEQQTGENSWSLDDLLVESILSTAFILPTPPRNPLYYTSL
LREIVTLTPGTVAPSLGRTIRTFYNALSSPHQIDVETVHRFADWFAIHLSNFNFGWAWKE
WIPDTGLEASHPKIVFMQRIVELEIRLAYFDRVKQTLPEEIQAVAMPAEEPAAVFTYADE
SHAYSAQAARLINSIKAKASAEVILADFESFKSSILDNSSATIPTDASEGMVRDQQQADV
VVRDLTIQCVLQVGSRSFSHFLNIVERYHSLLRQLSRSPRMRAAILAGAVRFWTRSQQWI
HIVVDKLLQYRIVEPADVVEFVFSPPVDEPATIRAGGDEKEGWVGFNTWTLLRLTLEKVN
GRVDQLKKRLEEIERKEAEEREKKDAAAAAGLPLDDDDMPAPAAPEEEEPMPLFPTSATL
PIRPSEPSQHAAGQQQLSSSDALANLDAIKSEQRKVLITAIKGFKAHLAAIEDDQDAWKH
WWTMGWYTQMVRCFNVQLMQNRQLVLSNAFGDAHGEQEQRLKQVFERAVDLLSE
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggacggctgggacacttcctccaacacaggctcggggtattctggccaacaccaacag
tcttatgataacaacaatggcggctacggagggggaggaggacggggcggcggcggcgga
ggatatggagcgcgcgatcaaggatgggccaattcacctcgtcgtggcggtcgaggcggc
taccgcggcggcggaggaggaggaggtggcgcataccaccatcaccaacaacaacagcag
cagcagtccgtagaacagcgcgaggaaaaccgcatccgatacatccgctcgcaactcttc
aagctcggcgaggagaaagatttccatcctccttccgacctcctcaaaatggcacgctgg
atcgaggacaaatccagagatggtgtccaacccattaccgccgctttcagggtcatggtc
accgaacagccccacaagactcccctcatcgccgccctcatcggcttcctttgcctctcg
caccaatccaagcccccaaccgcagccgcagccgctgctgcgcgttcagaggctggagtc
gaggaggaggatctaccttcaaccgaagtcaacgctgacgagcccgactcgttgggcatc
accattgtcaaagacctcgtcaaggcgttccgaagttacctcgatgcgcgtctctggcga
aacacgcgtctcagtctaaacctctttgccgcccttgttccgctccatatcatccccgca
agctccctgcgaacgctactggcttcttttgccgctgtgctagacgagcctgcagttgca
gccgccagagccgatcgtgcggccatttgcatcatcgagacgctctgccgtgctggtcaa
gatctgctggctggtggcgatgctgctcaagctgagctcgacgacttggtgcacaaagtg
gtgacttacgatgcagcacgcaaagtcgaggtccaactcactcaacccgtgcacgacctg
gactccatctggctcgaaggcttcccagacgctgtcaaggccttggaagagctcagagct
cgaggctacacccgtcctcgtttcctcccagtcccctcggatctactgcctgccgccatt
tcgccctcagctacccaggtgcccgaagaaaaacgaacagtgtcgcttccggacgtgctt
gtcccacccgaagaggacgcagaggatcaagggctcgacgtggcctatgcccaactgggc
cagcaccaggtcaagcgtcgcaaaatcgatacgggcaaaggcgagctcgaagagaagaaa
gctgctgtgggacctcaacgcgttagcctgcaaccgcgctggttttccaacacggtgccc
gccgtcgcttcgcctgcttcggttgtattgcgagccattgtcgccgatatgatcgatctg
tacgaagtcaaccgcaaagaggctgccaagctgttacttgatctgcccaactggctgcgc
agggggacttttgttggggccaagatttccaccgaggctgggctcttcggcgagatggat
gacgagcagcagactggcgagaacagctggtcgctcgacgacttgcttgtcgaatccatc
ctttccactgcctttatcctccccactccgccgcgcaatccgctctactacacttctctg
ctacgcgagatcgttacactgacaccgggcacagtggcgccttcgctcggccgaacgatc
cgaacgttctacaacgccctctcctccccgcaccaaatcgacgtggaaaccgtccaccgt
ttcgcagactggttcgccatccacctgtccaacttcaatttcggctgggcgtggaaggag
tggatcccggacacgggcttggaggcgtcgcatcccaagattgtgttcatgcagcgcatt
gtcgagctcgagatccggctggcgtacttcgatcgcgtcaagcagacgctgccggaggag
attcaggcggtggcgatgcctgcagaggaaccggctgctgttttcacctatgccgacgaa
tcacatgcatacagcgcgcaggcggcgaggttgatcaactcgatcaaggccaaggcgagc
gccgaggtgattttggccgactttgaatcgttcaagagcagcatcctcgacaactcgtcg
gccacgatccccactgacgccagcgagggaatggtgcgcgatcagcagcaggccgacgtg
gtcgtgcgcgacctcaccatccagtgcgtcctccaggtcggatcgcgctccttttcgcat
ttcctcaacattgtcgagcgctaccactcgctgcttcgtcagttgtcgcgcagtccacgc
atgcgtgccgccatccttgccggagcagtgcgcttctggacgcgctcgcagcagtggatc
cacattgtagtggacaagctgttgcagtaccgcattgtggaaccggcggatgtagttgag
tttgtgttcagtccgccggtggatgagccggctacgatccgtgcgggaggcgacgaaaag
gagggatgggtggggttcaacacgtggacgctgttgcggttgacgctggaaaaggtaaac
gggcgcgtggatcagctgaaaaagaggctggaggagatcgagcgcaaggaggccgaggag
agggagaagaaagacgcggctgctgcggctggattacccctggacgacgacgacatgccc
gcgcccgccgcacccgaagaagaagagccaatgccgctcttccccaccagtgccacgctc
cccatccgcccctcggaaccctcccaacatgccgctggccagcagcagctctcctcctcc
gacgcgctcgccaacctcgatgcgatcaagagcgaacagcgcaaggtcctcatcaccgcc
atcaaggggttcaaggcccacctcgccgcgatcgaggacgaccaagacgcgtggaagcac
tggtggaccatgggctggtatacgcagatggtcaggtgctttaacgtgcagctcatgcag
aaccggcagttggtgctcagcaatgcgtttggcgacgcgcatggcgagcaggagcaacgg
ctgaagcaggtgttcgaacgtgcagtggatctgctgtccgagtga
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