Sporisorium graminicola: EX895_003766
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Entry
EX895_003766 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
sgra
Sporisorium graminicola
Pathway
sgra03008
Ribosome biogenesis in eukaryotes
sgra03013
Nucleocytoplasmic transport
sgra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EX895_003766
03015 mRNA surveillance pathway
EX895_003766
03008 Ribosome biogenesis in eukaryotes
EX895_003766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_003766
03009 Ribosome biogenesis [BR:
sgra03009
]
EX895_003766
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EX895_003766
mRNA cycle factors
Stress granule specific factors
EX895_003766
Ribosome biogenesis [BR:
sgra03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
EX895_003766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
LRR_9
LRR_4
Motif
Other DBs
NCBI-GeneID:
40726661
NCBI-ProteinID:
XP_029739074
UniProt:
A0A4V6ETW3
LinkDB
All DBs
Position
SGRAM_22:join(453084..453266,453505..453810,453903..455393)
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AA seq
659 aa
AA seq
DB search
MSRRGGGRGGHTIAGAALRNAGLVVDGDVGMRDAAGPSRSRAGGAGGRKGQRNGGADPSN
PDGSGNPLRGRIARQRANPLGNRPATKGKKAAINVNDGLRAGNTASVLKSISSSKAQGGG
RIPGGGGIVFSGNDMPKTQNVISLIKRFLESRWNPQAKFLNLENMRADPILQAEGVKPPG
SAGAPKELGNVIWKLCSETYPDVVTISLANNGFRNLGPVSSLPAYFPNLQNLSLEGNDLK
WTKDLDTFATRKTKLTNLRELLLTGNPVHASAIAAGNEEGYRREVLSKFRQLTMLDQKPV
TETESGFANLPSSGKSKKVDADAAQVPLRNFPVPNKPGFVDAEAGAIMPNFLSKFFTLYD
SDRNQLSEAYAPLAQFSFCVNVVPPPRARAAGFLHTMPHQKELNFDRYQDNGNRNLMRVH
TPKNRHTSLHHGVGSILACLRKLPKTSHPLNDASKFVVDAWVLPNTVIGARLQGEERPEA
LLYINVHGEYAEAPSQGIRSFDRTFAVAPVPPDSPAAAAGWPCVILSDQLVVRHYSSPSA
WAPDSLPTGEVTAEQTQALQAAQQAGQTPVMPQPAAPGSIPVAGGAALPPHLQNQAPAAG
INEQQHAMSLQLATQTGLIYPFAVQCLQENGWDYNLAFTNFQNLKASNAIPPQAFAQPV
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtagaggaggaggacgtggtggccacaccatcgctggagctgccttgcgcaac
gctggtctggtcgtagatggcgacgtgggcatgcgcgatgctgccggcccgagcaggagc
agagcaggaggagctggtggcaggaaaggtcagcgaaacggtggggcagatccatccaat
cccgatggctctggaaacccgcttcgaggacgtatcgcgcgccagcgcgccaatccactc
ggcaaccgtcctgcaacaaagggcaagaaagctgccatcaatgtcaacgatggcctccga
gccggcaataccgcctcggtcctcaagagcatctcttcatcaaaagcacagggaggcggc
cgcatacctggtggcggcgggatcgtcttttctggcaatgacatgcccaagacgcaaaat
gtcatttcactcatcaagcgcttcctcgaatcacggtggaacccgcaggcgaagttcttg
aacctcgaaaacatgcgcgcagaccccattcttcaggccgaaggcgtcaagcctcctggc
agtgctggagcacccaaggagctcggcaacgtcatatggaagctctgctccgagacttat
cccgacgtagtcacgatatcgctcgccaacaacgggttccgaaatttgggacccgtcagc
tccttgcccgcctactttcccaacctgcagaatctgtccctcgaagggaacgacctcaag
tggacaaaggaccttgatacgttcgccacgcgaaagaccaagctcaccaatctcagggaa
ctgctgctgacggggaaccctgttcacgcaagcgcaattgcggctggcaacgaggaaggc
taccggcgcgaagtgctctccaagttccgtcaactcaccatgctcgaccagaagccagtc
accgagaccgagtcgggctttgccaacttgccatcttctggtaagtcgaagaaggtcgat
gcggacgccgcacaggttcctctgcgtaatttcccagtccccaacaaacctggctttgtc
gacgccgaagccggtgcaattatgcccaacttcctctccaaattcttcaccctttacgac
tcggaccgaaatcagctcagcgaagcgtatgctcctctggctcagttctccttctgcgtc
aatgttgtgccaccacctagggcccgtgccgcgggattcttgcacaccatgccccatcaa
aaggagctcaactttgatcgctaccaggacaacggcaatcgcaacctgatgcgcgttcac
actcccaagaaccgccacacgtccctgcatcacggcgtcggctcgattctggcgtgtctc
cgaaagctgcccaagacctcgcaccctctcaacgacgcttccaagtttgtcgtcgatgcc
tgggtgctaccgaacaccgtcatcggcgctaggctccagggcgaggagcgtcccgaggcg
ctgctttacatcaacgtacacggcgagtacgccgaggcacccagtcaaggtattcgctcg
tttgaccgaacctttgcggtcgcacccgtgccgcccgacagcccagctgccgctgctggc
tggccctgcgtcatcttgtcggatcagctggttgtgcgacattactctagcccgtctgct
tgggcgccggacagcctgcctacgggcgaggtgacggcggagcagacgcaggccttgcaa
gcagcacaacaggccggtcaaacgcctgtcatgcctcagccagctgctccgggatccatc
ccggtggctggtggcgctgctctgcctcctcatctgcagaaccaggctccagctgccggc
atcaacgagcagcaacacgccatgtcgctccaactggctactcagaccggcctcatctac
cctttcgcggtacagtgcctgcaggagaatggctgggactacaacctcgctttcaccaat
ttccagaacttgaaggcgagcaatgcaatcccaccacaggcgtttgctcagcccgtctaa
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