Sporisorium graminicola: EX895_004160
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Entry
EX895_004160 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K13095
splicing factor 1
Organism
sgra
Sporisorium graminicola
Pathway
sgra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EX895_004160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgra03041
]
EX895_004160
Spliceosome [BR:
sgra03041
]
Complex A
Other components
Complex A specific factors
EX895_004160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
KH_1
FUBP_C
zf-CCHC_3
zf-CCHC_2
Phage_tail_T
Motif
Other DBs
NCBI-GeneID:
40727055
NCBI-ProteinID:
XP_029738857
UniProt:
A0A4U7KV52
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All DBs
Position
SGRAM_23:89163..91094
Genome browser
AA seq
643 aa
AA seq
DB search
MSWRSNAQRTGMNAQPLQGARRWGGGGGGSDGPSDAPSGYGPPFDHYQQPRPYQSSYQQQ
QQSHPYSAAPPSSSSNNPRDAALAAAAAVAASIGIKRDRDAGGPPSTSYAAPSSSASAAN
DASGADGGPRKRKSRWGDANDKLTIPTAIGANVSAQELDKYAIQVRLDEIARKLRSGDFI
PPDRERSPSPPPTYDNQGRRTNTREVRYRKKLEDERVALVDRQLKLDPNFRPPSDYHAIK
RNQRPTEKVYLPIKEFPEINFFGLLVGPRGNTLKTMERQSGAKISIRGKGSVKDGKGKGG
DEDEEEMHCVVAADDEAAVKKCIRLINQVIETAASTPEGENDHKRNQLRELAALNGTLRD
DENQLCKNCGNKGHRAFECPEQRNWTAHIICHRCGGQGHLARDCTQGRVGSFGAGPNGPG
GPGAPAAAGTGNRQFDSEYANLMAELGEPAAAGAGGAPNSTPGAVNDASVAGGAAVGPDG
KKIPPWRNPEVWTQPGFGAPRGGDGGGRGGWGHRGGYNNRGDHPNVGGYNNAPHHQQQGH
PYHQQHQQAYGGYEQSATPATAGEQGGAEQQDYSAEWAAYYAAQAAAGAQTDASTAAAAT
ATAGADGAAAGQVDYTKEWEEYYRMQAAAAAQDGGAYGGAAGQ
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggaggagcaatgcgcagcggacgggcatgaacgcccaaccacttcaaggtgca
aggcgctggggtggcggaggcggtggcagtgacgggccgagcgatgctccgtccggatat
gggcccccgttcgaccactaccaacagccgcgtccctaccagtcttcataccagcaacag
cagcaatcacacccatactctgcagcaccgccctcgtcatcttccaataacccaagagac
gccgcattagcagctgcggcagccgtcgctgcctccatcggcatcaaacgcgaccgcgat
gctggtggcccaccctccacgtcctatgcagccccttcctcttccgcctcagctgccaac
gacgcttccggcgcagatggtgggccacgcaaacgcaaatcccgatggggcgatgccaac
gacaagctcaccatccccaccgccatcggcgccaatgtctcggcccaggaactagacaag
tacgccattcaagtgcgtctcgacgaaatcgcgcgcaaactccgctccggcgacttcatt
cctcccgaccgcgaacgctctccctcgcctcctcctacctacgacaaccaaggtcgccgt
accaacacccgcgaagtgcgctaccgaaagaaactcgaagacgaacgtgtcgccctggtc
gaccgtcaactcaagctcgaccccaacttccgtcctccctcggactaccatgcgatcaaa
cgcaaccagcgtcccaccgaaaaagtctacttgcccatcaaggaatttcccgagatcaac
ttttttggcctgctcgttggtccacgaggcaacacgctcaagactatggagcgtcagagc
ggcgccaagatctccatccgcggcaaaggctcggtcaaggacggtaaaggcaaaggcggg
gacgaggatgaagaagagatgcactgtgtggtggcagccgacgacgaagccgcggtgaag
aaatgcatcaggcttatcaaccaggtcatcgaaactgccgcctctacacccgaaggcgag
aatgaccacaagcggaaccagctccgcgaacttgcggcattgaacggtaccctgcgcgac
gacgagaaccagctctgcaagaactgcggcaacaaggggcatcgtgcctttgagtgcccc
gaacaacgcaactggactgcacacattatttgtcatcgctgcggaggtcaagggcatctc
gctagggattgcacacaaggtcgagtaggcagctttggtgccgggccgaatggacctggt
ggaccaggagctccggcggcagcaggcacgggcaatcgacagttcgattcggagtatgcc
aatttgatggctgagctcggcgaacctgctgcagccggcgctggtggtgcacccaacagc
acgccaggagcagtcaacgatgccagtgtcgcaggcggagcagcagtcggcccggacggt
aagaagattccaccatggaggaaccccgaagtgtggacgcagcctggttttggcgctcca
cgcggtggtgacggcggcggacgcggaggctggggtcatcgtggaggctacaacaaccgc
ggcgatcatcccaacgttggtggatacaacaatgcaccccaccatcaacagcagggccac
ccttaccaccagcagcaccagcaggcgtatggaggatacgaacaatccgccactccagcc
acagctggcgaacagggcggcgccgaacaacaagactactcggcagaatgggcagcttac
tacgcggcacaagctgccgctggagcgcagactgatgccagcacagctgctgctgcgacg
gcgaccgccggggccgatggagcagcagcgggccaagtagattacacaaaggagtgggag
gagtactatcgaatgcaggcggcggcggcggctcaggatggcggtgcttacggtggtgca
gctggccagtag
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integrated database retrieval system