Sporisorium graminicola: EX895_004249
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Entry
EX895_004249 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
sgra
Sporisorium graminicola
Pathway
sgra03030
DNA replication
sgra03410
Base excision repair
sgra03420
Nucleotide excision repair
sgra03430
Mismatch repair
sgra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EX895_004249
03410 Base excision repair
EX895_004249
03420 Nucleotide excision repair
EX895_004249
03430 Mismatch repair
EX895_004249
03440 Homologous recombination
EX895_004249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgra03032
]
EX895_004249
03400 DNA repair and recombination proteins [BR:
sgra03400
]
EX895_004249
Enzymes [BR:
sgra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EX895_004249
DNA replication proteins [BR:
sgra03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
EX895_004249
DNA repair and recombination proteins [BR:
sgra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
EX895_004249
MMR (mismatch excision repair)
DNA polymerase delta complex
EX895_004249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
40727144
NCBI-ProteinID:
XP_029738595
LinkDB
All DBs
Position
SGRAM_3:40691..43864
Genome browser
AA seq
1057 aa
AA seq
DB search
MAPVSTATLTRPSAGPSSNKRKIDEHHTSAFTDTLKKLKEEADSNQEVDDQALWPRPHLG
PLDVDHDAVTFQQIDIEEHQAIGQPPAIRMYGVTIEGHSVCAHIHGFLPYFYIHAPRGFT
ANTCNDFTNHLNVLFGGRTVHKSEIVSKKSLMGYAGNENVAFVKLTISDLRSVPRIRGSF
ERGEIGFRDLFTPGDACLTYENIAYTLRFMIDLKIVGMNWIRVQAANYKLRPESQKVSLC
QIELDCSCDAILSHAPDEEWSKVAPLRILSFDIECAGRKGVFPEPSVDPVIQIANMVTRQ
GESTPFVKNVFTLNTCSHIVGSQVLSFNKEIDMLEAWTKFVQEVDPDVVIGYNIANFDFP
YLLDRAKALKSTKFAYLGRERGVRTEAKDTHFSSKAYGTRDSKNTELQGRLQLDMLQVMQ
RDYKLRSYSLNSVSFEFLGEQKEDVHHSLITELQNAGPESRRRLAVYCLKDAYLPQRLMD
KLMCFINYIEMARVTGVPFNYLLSRGQQIKVVSQLFRKANEDNYLVPAYKGEGTEDQYEG
ATVLEPKAGYYDRPIATLDFASLYPSVMMAHNLCYTTLLDKKTIDRLELKQDEDYVITPN
NNYFATKKVRKGLLPTVLENLLAARKRAKADLKKETDPFKRAVLDGRQLALKISANSVYG
FTGATVGKLPCLEISMSTTAYGRQMIDQTKAYVEKHYTIANGYEHDAEVVYGDTDSVMIK
FGVPDLAKAMELGAEAAGLVSKTFVDPIKLEFEKVYFPYLLISKKRYAGLYWTRPEKYDK
MDTKGIETVRRDNCRLVQTVIDTCLRKMLIDRDVKGAEEYAKNIISDLLQNKVDMSQLVI
TKALAKSDYAAKQAHVELAERMRKRDAGSAPALGDRVAYVIVKAAKGAAAYERSEDPIYV
LDHNIPIDTRYYLENQLAKPLLRIFEPIMGPKANTMLNGEHTRVVQVATSNVGALMKFAV
KTVQCLGCRTPLKDQNAPVCKNCRPRVAQLYHEKLARASALEVEFARLWTCCQRCQGSLA
QDVLCTNKDCPIFFKRKRAQKDVEDAVHVVQRFDTAW
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgtatccacagcaacgctgacacggccatcggcagggccgtcctccaacaaa
cgcaagatcgacgagcatcacacctcggccttcaccgatacgctcaaaaagctcaaggag
gaagccgactcgaatcaagaggtcgacgatcaggctctctggccgcgtccccacctcgga
cccctcgacgtcgaccacgatgccgtcaccttccagcagatcgacatcgaggagcaccaa
gccatcggccagcctcccgccattcgcatgtacggcgtcaccatcgaaggtcactcggta
tgcgcccacatccatggctttctcccctacttttacatccacgcaccacgcggcttcacc
gccaacacctgcaacgactttaccaaccatctcaatgtcctctttggcggccgcaccgtc
cacaagtctgagatcgtcagcaagaagagtctcatgggctacgctggtaacgagaatgtc
gcctttgtcaaactcaccatctcggacctgcgaagcgttcccaggatccgtggctctttt
gaacgcggcgagatcggcttccgtgacctcttcaccccgggcgatgcctgcctcacttac
gagaacatcgcctacacgctccgcttcatgatcgatctcaagatcgtcggaatgaactgg
atccgcgtccaggccgccaactacaagctgcgccccgaaagccaaaaggtctcgctttgc
cagattgagctggactgcagctgcgacgccatcctctcgcacgcccccgacgaagagtgg
tccaaggtcgcaccgcttcgcatcctcagcttcgatatcgagtgtgctggccgcaaaggt
gtctttccagagccatccgtcgatcccgtcatccagattgccaacatggtcacacggcag
ggcgaatccacaccctttgtcaagaacgtcttcacgctcaacacatgctcgcacattgtc
ggcagtcaggtcctctcgttcaacaaggagatcgacatgcttgaggcctggaccaagttt
gtccaagaagtcgacccagacgtcgtcatcggctacaacattgccaatttcgatttcccc
tacctcctcgatcgagccaaggcactcaagtcgaccaaatttgcctacctcggtcgagag
cgcggcgttcgtactgaagctaaagatacccacttctcgtccaaagcctacggtacgcgc
gactccaaaaacaccgagttgcaagggcgtcttcagctcgacatgctccaagtcatgcag
cgcgactacaagctccgatcctactcgctcaactcggtctcattcgaattcctcggcgag
cagaaggaggatgtgcaccactcgctcatcaccgagctccagaacgccggtcccgagtcg
cgtcgtcgtctcgccgtctactgtctcaaggacgcctacctgccgcagcgactcatggac
aagctcatgtgttttatcaactacattgagatggccagagtcactggtgttcccttcaac
tacttgctatctcgaggtcagcagatcaaggtcgtctcgcaactcttccgcaaggccaac
gaggacaactacctcgtccccgcttacaaaggcgaaggcaccgaagaccagtacgaaggc
gccaccgtgctcgagcccaaggccggctactacgaccgccccatcgcaacgctcgatttc
gcctcgctgtatccctcggtcatgatggcgcacaacctctgctacacgacgctgctcgac
aagaagaccatcgaccgactcgagctcaaacaggacgaggactacgtgatcacccccaac
aacaactactttgccaccaaaaaggtgcgcaagggtctcttgcccactgtactcgaaaac
ctgctagcagcacgaaagcgcgctaaagctgaccttaaaaaggagacggaccctttcaag
cgtgccgtgctcgacggtcgtcagctggccctcaagatcagtgccaattcggtctacggt
ttcaccggtgccaccgtcggcaagctgccctgtctggaaatctcgatgagtaccactgct
tacggacgacagatgatcgaccagaccaaggcatacgtggagaagcactacacgattgcc
aacggctacgagcacgacgccgaggtcgtctacggtgacaccgattccgtcatgatcaag
tttggcgtgccggacttggccaaagccatggagcttggcgccgaagccgcaggcctggtc
tcgaaaactttcgtcgatccgatcaagctcgaattcgaaaaggtctacttcccctacctc
ctcatcagcaagaagcgatacgccggtctctattggacgcgcccggaaaagtacgacaag
atggacaccaagggtatcgagacggtgcgacgtgacaactgtcgattggtgcagaccgtc
atcgacacgtgtctgcgaaagatgctgatcgaccgtgacgtcaagggagccgaagaatat
gccaagaacattatttccgacttgctgcagaacaaggtcgacatgtcgcagctcgtcatc
accaaagcgttggctaaatcggactatgcggccaagcaggcgcacgtcgagctcgccgag
cgcatgcgcaagcgcgatgccggttccgcacccgcgctcggagaccgtgtcgcctacgtt
atcgtcaaagccgccaagggcgctgcagcctacgagcgatccgaagaccccatctatgtg
ctcgaccacaacatccccatcgacacgcgctactacctcgagaaccagttggccaaaccg
ctcctgcgcatctttgagcccatcatgggccccaaggccaacaccatgctcaacggcgag
cacacgcgtgttgttcaggtggccacctcgaacgttggcgcgctcatgaagtttgccgtc
aagacggtgcagtgtctcggctgccgcacgccgttgaaggaccagaatgcgcccgtgtgc
aaaaactgccggcccagggttgcccagctgtaccacgagaagctggcacgcgcttcggcg
ctcgaggtcgaattcgcgcggctctggacgtgctgccagcgatgtcaaggcagtttggcg
caggatgtgctgtgtacgaacaaggactgtcccatcttcttcaagcgcaagagggcgcag
aaggatgtcgaggatgcggtgcatgtcgtgcagcgattcgatacggcctggtga
DBGET
integrated database retrieval system
