KEGG   Sporisorium graminicola: EX895_004384
Entry
EX895_004384      CDS       T09331                                 
Name
(RefSeq) hypothetical protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
sgra  Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:sgra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sgra03009]
    EX895_004384
   04121 Ubiquitin system [BR:sgra04121]
    EX895_004384
Ribosome biogenesis [BR:sgra03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    EX895_004384
Ubiquitin system [BR:sgra04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     EX895_004384
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Sof1 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 EIF3I Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_NUP159_NUP214 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_SCAP WD_LRWD1 Beta-prop_NOL10_N Beta-prop_Vps41 PROPPIN
Other DBs
NCBI-GeneID: 40727279
NCBI-ProteinID: XP_029738729
UniProt: A0A4U7KQR2
LinkDB
Position
SGRAM_3:join(440896..440898,441002..441266,441352..441965,442054..442139,442221..442761)
AA seq 502 aa
MKIKALSRSLDVHAPARQGDPAPLSRNLDPALHPFDKPREYTRAVNAAKLDRLFAKPFVG
ALEGHVDGIYSIAKDTNRLNVVASGSGDGEIRLWDLARQKPIYVYPRAHSGIIQSICISP
LTFMSPTGNSSVGRRLLSCSTDRTVKVWDADPRPDGLGQTSFNAMDDDEDDDDMDAEMTT
GGSLRRGGLLSTRDKDVPPSEPLTVYSGKAAFNSLTHHASNTVFASASSSIQTWDLERGG
SSDPLLSMTWGPDAINVVRFNLSEREVLASAGSDRGIVLYDLRSGKPLTKMIMQMRANDI
AWNPTEPTVFAVASEDHNVYTFDMRHLNSATQIYKDHVAAVMSVDFSPTGTELVSGSYDR
TLRIWDYGKGNHSRDVYHTKRMQRIFSTSFSMDARFVLSGSDDGNLRIWKAKASEKLGLL
SGREMANREYAENLRKKWSGVGDVSKIEKQRHVPKAIKQAQRLKKTMIDARKNKEENRRK
HSKAGDKKPKAARKEAILSQRD
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgaaaatcaaggcgctttccaggtcgctcgatgtccacgcccctgctcgacagggcgac
cctgcccctctatccagaaacctcgatccagcactccatcctttcgacaaaccaagagag
tacacacgtgcagttaatgctgccaagctggacagactcttcgccaagccattcgtcgga
gccctggaaggacacgttgacggcatctactcgatcgcaaaggacaccaatcgactcaat
gtcgttgcttcgggaagcggcgatggagaaatccgcctttgggatctggcccgacaaaag
cctatctacgtctacccacgggcacattccggtatcattcagtcgatctgcatttctcct
cttaccttcatgtcgcccactggcaactcgtcggttggtcgccgattgctttcttgctcg
acagataggactgtcaaggtctgggacgccgatccgcgccctgacggtcttggccaaacc
agcttcaatgccatggatgacgacgaagatgacgacgacatggatgcagaaatgaccacg
ggtggtagcttgagaaggggaggtctcctcagcacacgcgacaaagacgtgccacctagc
gagccattgaccgtgtacagtggcaaggcggcattcaactcgctcacgcatcacgcttcc
aatacggtctttgcttcggcttcatcctcgattcagacttgggacctcgagcgcggcgga
tcctcggatccattactgtccatgacgtggggcccagatgccatcaacgtggtgcggttc
aacctcagcgagcgcgaggttctcgccagtgcaggaagcgaccgtggcattgttctctac
gacctgcgcagcggaaagcctttgaccaagatgatcatgcagatgcgagcaaacgacatt
gcatggaacccgacagagccgaccgtctttgccgtggcgagcgaggatcacaacgtctac
acattcgacatgcgacacctcaactcggcgacacaaatctacaaagaccacgttgccgcc
gtcatgtcggtcgacttttcacccacaggcaccgagcttgtctcaggctcgtacgatcgt
acactgcgcatctgggactatggcaagggcaaccattcgcgcgatgtctatcacaccaag
cgcatgcagcgcatcttctccacctcgttctccatggacgcgcgcttcgtgctcagcggc
tcggacgacggcaacctgcgcatctggaaggccaaggcgagcgagaagctgggactgctc
agcgggagggagatggccaaccgagaatatgccgagaatttgcgcaagaagtggagcggg
gtgggcgatgtatccaagatcgagaagcagaggcacgtgcccaaggcgatcaagcaagcg
cagaggctcaagaagaccatgatcgacgccaggaagaacaaggaagagaacaggaggaag
cactccaaggcaggcgataagaagcccaaagcggcgcgaaaagaggccatcctctctcaa
cgtgattag

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