Sporisorium graminicola: EX895_004752
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Entry
EX895_004752 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
sgra
Sporisorium graminicola
Pathway
sgra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EX895_004752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_004752
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EX895_004752
mRNA degradation factors
3'-5' decay
Pan complex
EX895_004752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
40727647
NCBI-ProteinID:
XP_029737912
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All DBs
Position
SGRAM_5:complement(13213..15810)
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AA seq
865 aa
AA seq
DB search
MYHYSQSQQPPYHHQHKQQPQPPPHFNHAHAPPGPPHQPYQQQHQPPPSQPQSHNRPGMQ
QHHHHHSHQQQHIPPAFNGALPARPTRSSAIPIVAPASTPPPGAKPALSYGATTAAGVAA
SQPEASKSPVGANATASARKPCRNVAIYGHCKYQNDGCPFDHASASVTNASSANAQTPKS
PAAQFASGFSAASSSPATSPNKARGANNGPTSPLKGALSARNVAAPVFVPKIGGSSSPSL
SAASPAPTARSAMDGVASDVNDMRIDSASTKEFTPSAYTQNGPGTPNMYNSSYDVDPINS
SFDPSHNGESQMGGTSASSAVQGQASRPYNPYEHMNEFGDPTPPQGPPGLGLGAGMDYYS
AAANGAAKIRQPLHYHLYAPPLPHVSNLHPHHLTANAFFLNPNQREELQRKQEAMLASVP
PPELGGPHLPEELHVYHSLVPLEHPGPGAPSSMSMPPGLIDPRMGAPGANGATGASGDHS
KVFGYRSHSYKATCTLDGKRYVLRRLEGFRLQHEAAIALVERWRRIRHPSIVSVREAFTT
RAFGDQSIVFVYDYHPLASTLYAEHMTIKAAQPDRRTGRMQPVSMQVPERTLWSYLCQLT
SALRSIHSSNLAARCIETSKVLRTGKNRVRINCCSVFDVIAYNPDENGPEALKAQQLEDM
VNLGALIVGIGLNNYSATSDIASSLAIFAGRYSAELKNVVAWLVGQSPAPHESAEDTTEV
PRNVGELVKVLGSHCADEMDSALNYTDLMENSLMKELENGRLVRLLCKFGFINERPEFDH
DPRWAETGDRYVIKLFRDHVFHSVDEAGRPVVDLSHILTNLNKLDAGTDEKIMLTSRDEH
SCLVVSYREIKNCIENAFQDLSRTR
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtatcactattcacagtctcagcaaccaccttaccaccaccagcataagcagcaacca
caacctccacctcacttcaaccacgcccacgctcctcctggcccgcctcatcagccctac
caacagcagcaccaaccaccaccgtctcagccgcagtctcacaatcggcctggcatgcag
caacaccaccaccaccattcgcaccaacagcagcacatcccgcccgcgttcaatggcgct
ctaccggccagacccacccgcagctccgccatccccatcgtagcacctgcgtccactcca
cctcctggagcaaagcctgcactttcttatggtgccaccactgcggccggcgtcgcggcg
tcgcagcccgaagcatccaagtctcccgtaggcgccaatgcaaccgcctccgctcgcaag
ccgtgccgcaacgtcgccatctacggtcattgcaagtatcagaacgatggctgtcccttt
gatcatgcgtctgcatcggtgacgaatgcctcgagcgcgaatgcacagactcccaagtca
cccgcagcgcaatttgcgtccggattttcagcggcctcatcgtctcctgccacctcgccc
aacaaggcgagaggcgccaacaacggccctactagcccgctcaagggagccctcagcgca
cgcaacgtcgcagcgcccgtatttgtgcccaagatcggtggtagctcctcgccttcgctc
tctgcggcttcccccgcccccaccgcccggtcagcgatggacggcgtcgcatcggatgtc
aacgacatgaggatcgattcggccagcaccaaagagtttactcccagcgcatacacccag
aacggtcccggaactcccaacatgtacaattccagctatgatgtcgaccccatcaacagc
tcctttgatccgtcccacaacggcgagtctcagatgggcggcacctcggcgtcctcggca
gttcagggccaggcttcgcgcccgtacaacccgtacgagcacatgaacgagtttggtgac
ccgacgcctccccaaggtccccccggtcttggtctcggcgccggcatggactactactct
gcagccgcgaatggcgccgccaagattcgacagccgctccactaccacctctacgctcca
ccgctgccgcacgtctcaaacctgcatccgcaccacctcactgccaatgccttcttcctc
aatccgaaccagcgcgaggaactccagcgcaagcaagaggccatgctcgcaagtgtgcct
cctccagaattgggcggaccccacctgcctgaggagctgcacgtctaccactctctcgta
ccgctcgagcatcccggtcctggcgcgccctcctcgatgagcatgccacccggcctcatc
gatcctcgtatgggtgctcctggcgccaacggagcaacgggcgcgtcgggcgaccacagc
aaagtgtttggataccgatctcactcgtacaaggccacttgcacgctcgatggcaagcga
tacgtgctgcgcaggctcgaaggcttccgtctgcagcatgaggctgctatcgccctcgtg
gaacgctggcgccgcatccgtcatcccagcattgtcagcgtgcgcgaagcttttactacg
cgtgcttttggcgatcagtcgattgtgtttgtctacgattaccatcccttggcctctacg
ctgtatgccgagcatatgaccatcaaggcagcccaacccgatcgtcgcaccggccgcatg
cagcccgtgtcgatgcaggtgcccgagcgcacgctgtggagctacctctgccagctcacc
tcggcgttgcgctcgattcactcgagcaacctcgcagctcgatgcatcgagacgagcaaa
gtgctgcgcacgggcaagaaccgcgtgcgcatcaactgctgctcggtgtttgacgtgatc
gcctacaatccagacgaaaatgggcccgaggcgctcaaggcgcagcagctcgaggacatg
gtcaatctgggtgcgctcatcgttggcatcggcctcaacaactactctgcgaccagcgac
atcgcttcgagcctggccatctttgctgggcgctactctgccgagctcaagaacgtcgtg
gcttggctggtggggcagtcgcctgctccccacgagtctgctgaagacaccacggaggtg
ccacgcaacgtcggtgagctggtcaaggtgctcggcagccactgcgccgacgagatggac
tctgcgctcaactatacggatctgatggaaaactcgctgatgaaggagctcgaaaacggc
cgtctggtgcgtctgctgtgcaagtttggattcatcaacgaacgacccgagtttgatcac
gacccacggtgggccgagacgggcgaccggtatgtgatcaagctgttccgcgaccatgtg
ttccactcggtcgacgaggctggccgaccggtggtggatctgagccacatcctgaccaac
ctgaacaagcttgacgcgggcaccgacgagaaaatcatgctcacatcgcgcgacgaacac
agttgcctggtggtcagctaccgagagatcaagaactgcattgaaaacgctttccaggac
ctgtcgcgcacgcggtag
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