Sporisorium graminicola: EX895_004829
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Entry
EX895_004829 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
sgra
Sporisorium graminicola
Pathway
sgra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EX895_004829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_004829
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EX895_004829
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
EX895_004829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
40727724
NCBI-ProteinID:
XP_029737989
UniProt:
A0A4U7KNX9
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All DBs
Position
SGRAM_5:complement(230474..231427)
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AA seq
317 aa
AA seq
DB search
MAGRIREVWAENLEVEMALLRETIETYPYVAMDTEFPGIVARPIGTFKGSSDYHYQTLRC
NVDLLKLIQLGITLCDENGNLPPDVCTWQFNFRFSINDDMCAPDSLDLLTKAGLDFDRHE
RMGIDVEHFGELLITSGLALFDDVKWVSFHSGYDFGYLLKVVTCSPLPAQEADFFALLRV
WFPCIYDIKFLMRSCKTLKGGLQDVADDLQVSRIGQQHQAGSDSLLTATTFFKMRQKYFD
GSIDDSKYLGCLYGFSSSSSHVNGMVHYSQGRPVSMQSFHDASAIPRSVSGGYAAAGGYG
SNFGSPFKSSLSASTER
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcagggagaatacgcgaagtatgggcggagaacctcgaggtggagatggccctgctg
cgcgagaccatcgaaacgtacccctatgttgccatggacaccgaattccctggtatcgtg
gctcgaccaataggcacattcaagggctcctcggattatcactaccagacgctgcgctgc
aatgtggacctgctcaagctcatccagcttggcatcacactctgcgatgagaacggcaac
ctgccaccggatgtctgcacgtggcagtttaactttcgcttcagcatcaacgacgacatg
tgcgcgcccgactcgctggatctgctcaccaaggccggtctggatttcgaccgacacgaa
aggatgggcatcgacgtcgagcactttggcgagctgcttatcacgtcgggtctggcgctt
tttgacgacgtcaagtgggtctccttccacagcggatacgactttggctacttgctcaag
gtggtcacctgcagtccgctgcctgcgcaggaagccgactttttcgcgctgctgcgggtg
tggttcccctgcatctacgacatcaagtttctcatgaggagctgcaagacgctcaaaggg
ggcttgcaagacgtcgccgacgacctgcaggtcagtcgaattggtcaacagcaccaggct
ggaagtgacagcttgctcaccgcgacgacctttttcaagatgcgacaaaagtactttgac
ggctcgatcgacgactcgaagtacctcggatgtctgtacggcttttcgtcgagctcgtcg
cacgtcaacggaatggtgcactacagccaaggccggcctgtgtcgatgcagagcttccac
gacgcttctgcgatccctcgctcggtgtcgggcgggtacgctgctgcaggaggctacggc
tctaactttggcagtcccttcaaatcaagcctgtccgcctcaaccgagcgctga
DBGET
integrated database retrieval system