Sporisorium graminicola: EX895_004958
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Entry
EX895_004958 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sgra01009
]
EX895_004958
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_004958
04131 Membrane trafficking [BR:
sgra04131
]
EX895_004958
03036 Chromosome and associated proteins [BR:
sgra03036
]
EX895_004958
Enzymes [BR:
sgra01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
EX895_004958
Protein phosphatases and associated proteins [BR:
sgra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
EX895_004958
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
EX895_004958
Membrane trafficking [BR:
sgra04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
EX895_004958
Chromosome and associated proteins [BR:
sgra03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
EX895_004958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Motif
Other DBs
NCBI-GeneID:
40727853
NCBI-ProteinID:
XP_029738118
UniProt:
A0A4U7KPH8
LinkDB
All DBs
Position
SGRAM_5:complement(join(590686..590777,590877..592514,592605..593070))
Genome browser
AA seq
731 aa
AA seq
DB search
MSESSRLPAISRMDEPILIDDDDEDDVAAIPSINRAPAHSPSGSLRDVTPAMSVETDTTT
SNDPINGFVNSNIDQQSSLDQYRTGYVYSADMMLHVNPVDPEHPERPLRIWKIYLKFKHR
DLFSRMKRIPIREVTRAEVDLVHDKGIWDGVEQSARLHSDFLKEQVLALESSSSLYINEH
SAYAARLSCGGAIELCDAVAAGRIQNGFAIVRPPGHHAEPHRSMGFCFYNNVAVATRHVM
RKHDHINKVLILDWDVHHGNGTQKAFENDADVLYISIHRYDADGSFYPGSSYGNYDSDGT
GAGKGKSVNVPWPTHGMGDADYMYAFQHLVMPIAYQFEPDLVIISAGFDAADGDPIGLNR
VSPGGFAQMTHQLTSLCQGKVAVVLEGGYNPDAVANSALAVTEVLLSLNTAEPRETVAST
IAANTVHRVIRHHKRYWPSLLVSDIEADDVDWASPNPPPSVDVIELLAAYRQTVITEEYD
LFEVPLYDSPHSAFGGHALCSEGILDQFSTIIFFVHDMGNLRSERPRSVLDHQKEAYRLV
DASKCVMDYAKSQRYGLVDINVVRQLSTNRPILPADSRDLVLHGDVEGMKEACEAAEFIW
DNIIALAGRLQGPCDVVLMGLGTGCNVLTNIIDKKDVKSRVKAVVHVVGYGKMPGISVAK
DLETKKWYYKNSKVLAPADHRHLLERGDAAPLKRYGRITPIHKTAPINVLSESMASIGVF
IEKKLAVAKRP
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatcatcacgtctgcctgccatctctcgcatggacgagccgatcttaatcgac
gacgacgacgaagatgacgttgcagccattccatccatcaaccgtgccccagcacattct
ccctcaggctctctgcgcgacgtcacgcctgccatgtcggtcgagacagacaccaccacc
agcaacgatccaatcaatggtttcgtcaatagcaacatcgaccagcaatcctccctcgac
caatacaggaccggctacgtgtactccgcagatatgatgctccacgtcaacccggtcgat
cccgagcatcccgagaggccattacgaatctggaaaatatacttgaagttcaagcacagg
gatctcttctcccgtatgaagcggattccaattcgggaagtgacccgagctgaggtagat
cttgtccacgacaagggcatctgggatggtgtcgaacagtcggcacgcctgcactcggac
ttcttgaaagagcaggtccttgcgctggagagctccagctctctttacatcaacgaacac
tcggcctatgccgcaagactctcttgcggaggggccatcgaactgtgcgatgccgtcgca
gccggccgcatccagaacgggtttgccatcgtaaggccccctggccatcacgcagagcct
cacaggagcatgggcttctgcttctacaacaacgttgccgtagcgacacgacacgtcatg
cgaaaacacgatcacattaacaaggtcctcatcctcgactgggacgtgcaccacggcaac
ggaacgcaaaaagcctttgagaacgatgcagatgtgctatacatctcgatccatcgatac
gacgccgacggcagcttttatcctggttccagctatggtaactacgatagcgacggtacg
ggggctggtaagggcaaatcggtcaatgtgccgtggcccacccatggcatgggcgatgca
gattacatgtatgcgttccagcatctcgtgatgcccatcgcctaccagttcgagccggac
ctcgtcatcatttccgccggctttgatgctgctgacggcgatcccattggtctcaacagg
gtctccccaggcggatttgcacagatgacgcaccagctcacctcgctctgccagggcaag
gtcgccgtcgtgctcgaaggcggttacaacccggatgctgtggccaacagcgccctagcc
gtcaccgaagtactcttgtccctcaatacagccgagccacgagagactgtggccagcacc
atcgccgcaaataccgtccatagagtcatacgccaccacaagcggtattggccctctctt
ctcgtgtcggacatcgaagcggatgacgtcgactgggcttcccccaacccgcctccttcg
gtcgatgtgatcgagttactcgccgcttaccgtcagacggtgattaccgaagagtatgac
ctgtttgaagtgcctctgtacgacagtccacacagcgcattcggcggacatgccttgtgt
tccgagggcatcctggaccaattctccaccatcatctttttcgtacacgatatgggcaac
ttgcgctccgaacggccgcgatcggtgctggatcaccagaaagaagcctacaggctcgtc
gatgcctcgaaatgcgttatggactatgccaagtcgcaacgctatggtctggtcgacatc
aacgtcgtcaggcaactctccaccaatagacctatccttcccgcagattcgcgagacttg
gtgctgcacggtgatgtcgaagggatgaaagaagcatgcgaagccgcagagttcatctgg
gacaacattattgcgctcgccgggcgcttgcaagggccctgcgacgtggtcctgatggga
ctcggcactggttgcaacgttctgacaaacatcatcgacaaaaaggatgtcaagtcgcgc
gtcaaggccgtcgtccacgtcgtaggttatggcaagatgcccggcatctcggtggcaaag
gatctcgagaccaagaaatggtactacaaaaattcgaaggtccttgcgccggcagaccac
cgacacctgctggaacgaggcgatgctgcgcccctcaagaggtacggcaggatcacgcca
atccacaagacggcccccatcaacgtgctcagtgagagcatggccagcatcggggttttc
atcgagaaaaaactcgctgtagccaagagaccctag
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integrated database retrieval system
