Sporisorium graminicola: EX895_005321
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Entry
EX895_005321 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
sgra
Sporisorium graminicola
Pathway
sgra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EX895_005321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgra03400
]
EX895_005321
Enzymes [BR:
sgra01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
EX895_005321
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
EX895_005321
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
EX895_005321
DNA repair and recombination proteins [BR:
sgra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
EX895_005321
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
EX895_005321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
Motif
Other DBs
NCBI-GeneID:
40728216
NCBI-ProteinID:
XP_029737766
UniProt:
A0A4U7KN84
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All DBs
Position
SGRAM_6:521186..522130
Genome browser
AA seq
314 aa
AA seq
DB search
MTSRWNQALVRIASAKDPTTLSSDDKVLFHDDRTITIYDKFAKARYHFLVLPRIPFKASS
SASSSKPQQGIPSLSASDGKLNFGATSSNTVPASHMQSISALLASPYTSEVLEAVRKASE
DVIQYIRNDMLKDHGTTWDIERAFHAVPSMDHLHLHVVSMDLVSDRLKHKKHYLSFHPTI
GFALRLDQVEQWVQQGKKTLAKSKPAYEQLLKGPLVSHHTAQVFRYFPELKVHLETYWRK
SLLVDRGRSTDDGATNAGVKRVASHEVSQLSGASIAGATGSRPLQSRKLEASHLALKRTP
DSHSEDDEPSLPTR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacatctcggtggaatcaagcattggtgcgcatcgcctctgccaaagatcctaccact
ttgtcgtccgatgacaaggttctctttcacgatgatcgcaccatcaccatctacgataaa
tttgccaaagcaagatatcactttcttgttctgccgcgcatccctttcaaggcttcgagc
tctgcatcaagcagcaaaccccaacaggggattccatcgctttcggcatcggatggcaag
cttaacttcggcgccaccagcagcaacacggtacctgcatcccacatgcagagcatctcg
gcattgctggccagcccatacacatccgaggtgctcgaggcggtgcgcaaggccagcgaa
gacgtaatccagtatatccgtaacgacatgctcaaggatcatggcacgacttgggacatc
gagcgagcctttcacgctgtgccgagcatggaccacttgcacctgcacgtcgtgtcgatg
gacctcgtctcagaccgactcaagcacaagaagcactatctctcgttccacccaactatc
ggatttgccctgcgacttgatcaggtcgaacagtgggtgcaacagggaaagaagacgctg
gcaaagagcaaacctgcatacgaacagctgctgaaaggcccactcgtgagccaccatacg
gctcaagtgtttcgctactttcccgagctcaaggtgcatcttgagacatactggcggaag
agccttctggtggatcgcggacgatccacagacgacggggccacgaatgcaggcgtcaag
agagtggcgtcacacgaggtgtcgcagctatccggcgcttccattgctggtgcaacgggg
tcgcgaccgttgcagagtcgcaagctggaggcgtcgcatcttgccttgaagagaacacct
gattcgcactcggaggacgacgagccatccctgccgaccagatga
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