Sporisorium graminicola: EX895_005332
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Entry
EX895_005332 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K11097
small nuclear ribonucleoprotein E
Organism
sgra
Sporisorium graminicola
Pathway
sgra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EX895_005332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_005332
03041 Spliceosome [BR:
sgra03041
]
EX895_005332
03032 DNA replication proteins [BR:
sgra03032
]
EX895_005332
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
EX895_005332
Spliceosome [BR:
sgra03041
]
Complex A
U1 snRNP components
Sm proteins
EX895_005332
U2 snRNP components
EX895_005332
Complex B
U1 snRNP components
EX895_005332
U4/U6.U5 tri-snRNP components
EX895_005332
Complex C
U2 snRNP components
EX895_005332
DNA replication proteins [BR:
sgra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
EX895_005332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
40728227
NCBI-ProteinID:
XP_029737776
LinkDB
All DBs
Position
SGRAM_6:complement(join(544270..544407,544497..544622))
Genome browser
AA seq
87 aa
AA seq
DB search
MSGRSKVSVQPINIIFRHLQQQTRVSLWLYDNVDFRIEGKIIGFDEFMNVTLADAEEVWT
KKDNKRVELGRILLKGDNIVSASQAFA
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggacgaagcaaagtatcggtccagccgatcaatattatctttcgacacttgcag
caacagacaagagtctcgctatggctctatgacaatgtcgactttcgcatcgagggaaag
attatcggctttgacgagttcatgaacgtgacgttggcggatgcagaggaagtgtggaca
aagaaggacaacaagcgcgtagagctcggccgcatcttgttgaaaggcgacaacatcgta
agtgcatcacaggcctttgcctag
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