Sporisorium graminicola: EX895_005498
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Entry
EX895_005498 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
sgra
Sporisorium graminicola
Pathway
sgra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EX895_005498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgra03400
]
EX895_005498
DNA repair and recombination proteins [BR:
sgra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EX895_005498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
Acetyltransf_13
zf-C2H2_3
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
40728393
NCBI-ProteinID:
XP_029737321
UniProt:
A0A4U7KN57
LinkDB
All DBs
Position
SGRAM_7:join(115119..118693,118807..119165,119298..120523)
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AA seq
1719 aa
AA seq
DB search
MPSKPSSATKQSTLLGFFSKAPAPQGPASASPASQQKAAAKPPSAQTAQPKTNGKDASKS
SPKMAKAQPLETPPPSESRSSTRASRQPPSDATESEAARPPSSSPTFHCSSSLSTDSLIP
TTQAAPRPPHKSSDSDDLTPPPSSDIDNMDVDEYDEDTEQPLFRRRAAAKRPVTYAESDS
EGGAAVDTDSEDELPRSAKSRKASAAKRARKTRDEDDFIVPDDHDEDEEELPLDAANASE
DDDNGDAALASEPGSDADDDGKPSKRGKTSANNKKAPATSFSRSIGSNSTLNSFQLGRIS
SASASPSSFLHVGASNGTARAGPSAASLSHLTKAERRVIEEKRKKAENEEAYSFLLDLRD
KDGNRPGDVEYDSRTVYIPRSAWKDFTPFERQFWEIKQNHWDTVLFFQKGKFYELYEEDA
LIGHREFDLKLTDRVKMKMVGVPESSFDIFAAKFLALGYKVGRVDQTETAVAKGMRVGER
SRGGGSEIVNRELRHVLTSGTIVDAASLPDDLNSYCVSIKESATPGRNGPIFGVCTLDAA
TAEFNLTEFEDDESRTRLETLLRSLRLKEVLHEKGGLSAPTLRVLRSTVPSTAQTTMLKP
GVEFLEPESTLRKLNALFNPNVDAEACLDSLDPVDPALLPEGITSMVDRACAMSALGGML
CYLAQLNLDRDLCSSRNFNIFDPLRQDKCLVLDAQSLTHLNVLQNDEGTDEGTLHRLLNR
CVTPSGKRLFKLWLVAPLATADTIRARQDAVEDLLKNPCFGDEFETFGKAVPDIERIVPR
VRAGKCRPRDFTAVLKSLARFEKAVKQLRSQCQSFETAVIDTLLQSIPPVSTMARELQSS
FRVTEDGSFHPIEGAFEPYDRAETAIAEVEAQLEHEIETYRKQLKLNASKCAWKHLGTKD
IFQIEVPVAVKVPSNWTKLSGTKDRNRWYSPKVRDLVQDIKEARETRLAALKQFHQSLFA
SFADQSDVFLQAVKTLAEIDCLLSLAKASYAIGEPSCRPELVEHETALLEFEELRHPCIA
GDNVEFIPNDIRLGGESDEVVILTGGNMAGKSTTARTSATAVILAQLGCRVPASRARLSP
VDRIASRMGANDQIFRNNSTFMVEMLEASRIISECTPRSLVIMDELGRGTSTFDGQAIAF
AVLHHLVSRTRCLTFFLTHYTNLAYDFNSYSRVSNKHMQVLVDDGKREVIFTYRLVDGIA
ESSYGTQVAALAGVPHEICDRAAAVSKQFAEATKASQAEKNKSAIPLALLSDFVHLFKLA
GEPTPASSDRNAEAKALTTLSQLDIIRSQVAALAQAGSAAKSLPSPLPTLTSVDSEDEMA
VDDQQDEPARLLPPAVKKITTYAGRSRRAVTEDVEQQPLCFSSREDEDDEEAMPKAASSP
ILSSVHTPLFPTMRHSKPSARKTQSKAVKAATPALAREPEQLILDLGQRIRIRCNECDMQ
YDTSSAEDCTLHARHHERTVKGLDWSAKALTVSGEMASQLTLSRRRGRGKAVLSGKQSAA
GSGSEAGQPESIVIRCYDMAALKDATATRKINELLQTVDDALGAAPVSVSEIQGCKVLVA
ICAGRAAGAAVVGRIPAGHAREVLPSSGNKENDAVDASSAVDDAGAAASKLRATTVWNDA
GDAIFVSDALPSSKTPPIGVFRIHVIPGWRRTGMASALLDAAADNSVYGFDLDGLVKTYG
SRARSVAFSQPTEAGRKLAEAWIRKDATNAAARLVVFEA
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcaagccatcttccgcgaccaagcagtcgacgctgcttggcttcttctccaag
gctcctgcgcctcagggaccagcttccgcatcaccagcatcccagcagaaggcggctgca
aagcccccttccgcacagacggctcagccgaagacgaatggaaaagacgcgtccaagtcg
tcgccgaagatggccaaagctcagcctctcgagacgcctccaccaagcgagtccagatcg
agcactcgcgcttctcgacaaccaccaagtgatgccactgaaagcgaggctgctcgacca
ccctcatcttcccccacttttcattgctcgagctccctgtccaccgacagccttatcccc
accacacaagctgctccaagaccaccacacaagtcttccgactcggacgacctcacgccg
cccccgagcagcgacattgacaacatggatgtcgacgagtacgacgaagacaccgagcag
ccgctcttccgtcgccgggctgcagccaaacggcccgtgacgtacgcagaatccgactcg
gagggcggcgccgccgtcgacacggacagcgaagacgagctgccccgatccgccaagagc
cgcaaggccagtgcagccaagcgagctcgcaagacgcgcgacgaggatgacttcatcgtt
cctgacgatcacgacgaggacgaggaagagctacccttggacgcagctaatgcatccgaa
gacgatgacaacggcgacgctgcccttgccagcgaacctggcagcgatgcagacgatgac
ggcaaaccatcgaaacgcggaaagaccagcgcaaacaacaaaaaggcacccgccacctct
ttctcccgatccatcggctccaactcaacactcaactcgttccagctgggcagaatctcg
tctgcgtcagcatcgcccagctcttttctgcacgtcggcgccagcaatggcactgcccgc
gccggcccttccgctgcctccctctcccacctcaccaaagcagaacgccgagtcatcgaa
gagaagcgcaagaaggccgagaacgaagaggcgtacagcttcctgctcgatttgcgcgac
aaggacggcaaccgtcctggcgacgtcgaatatgactcgcgcaccgtctacattcccagg
tcggcctggaaggacttcacgcccttcgagaggcaattctgggagatcaagcagaaccat
tgggacacggtgcttttcttccaaaagggcaaattctatgagctctacgaggaagacgcg
ctgatcggccatcgcgagttcgacctcaagctcaccgacagagtcaagatgaagatggtt
ggcgtgcctgaatcttcgttcgacatcttcgccgctaagttcctcgctctcggatacaag
gtcggccgcgtcgaccagaccgagactgccgtggccaagggcatgcgcgtgggcgaacgt
tcccggggtggtggctccgagattgtcaaccgcgagctccgacacgtgttgaccagcggc
accatcgtcgacgctgcctcgctgcccgacgacctcaacagctactgcgtgtcgatcaag
gaatccgctacgcctggccgcaacggtcccatttttggcgtgtgtacgctcgacgctgcc
accgccgagttcaacttgaccgagtttgaggacgacgagtcgaggactaggctcgagacc
ttgctccgttcgcttcgtctcaaggaggtcctccacgagaagggagggctttcggcccca
acgctgcgcgtcctgcgcagcaccgttcccagcacggcgcagaccaccatgctcaagcct
ggtgtcgagttcttggagcccgagagcacactgcgcaagctcaacgccctcttcaatccc
aacgtggacgccgaagcttgtcttgattcgctcgatcccgtcgacccagccttactgccc
gagggcatcacatccatggtggatcgagcctgcgccatgtcggcgcttggcggcatgctg
tgctacctggcccaactcaacctcgaccgcgatctgtgctccagccgcaacttcaacatc
tttgacccgctgcgccaagacaagtgcctcgtgctcgatgcgcagtcgctcacccacctc
aacgtgctgcagaacgacgagggtacggacgagggcacactccaccgcctgctcaaccgc
tgcgtgaccccctctggaaagcgtctcttcaaactctggcttgtcgccccgcttgcgacc
gccgacaccattcgagcgcgccaggacgcagtcgaagacctgctcaagaacccatgcttt
ggcgacgagttcgagacgttcggcaaagccgtccctgacatcgagcgcatcgtgccgcgc
gtccgtgctggcaagtgccgtcctcgcgacttcaccgcagtgctcaagtcgctggcccgc
ttcgaaaaggcggtcaagcagcttcgttctcagtgccaaagcttcgagaccgcggtgatc
gatactctgctgcagtccatcccgcccgtgtctacgatggcgcgcgaattgcagtcgagc
ttcagggtcaccgaggatggctcgttccatcccatcgagggcgccttcgaaccgtacgac
cgtgccgagaccgccatcgccgaggtcgaggcacagctcgagcacgagatcgagacgtac
cgcaagcagctcaagctcaatgcctccaagtgtgcctggaagcatctcggcaccaaggac
atcttccagattgaggtgcccgtcgccgtcaaagtgcccagcaactggaccaagcttagc
ggcaccaaggaccgaaaccgctggtattcgcccaaggtgcgcgatctcgtccaagacatc
aaggaggcacgcgagactcggcttgccgcactcaagcagttccaccagagcctgtttgcc
agctttgccgaccagagcgatgtgttcctccaggctgtcaagacgttggccgaaatcgac
tgcctgctctcgctggccaaggcgtcgtacgcgatcggcgagccctcgtgccgacccgag
ctggtcgagcacgagacggcgctgctcgagttcgaagagctgcgtcacccgtgcatcgct
ggcgacaatgtcgagttcattcccaacgacatccgactcggcggtgagagtgacgaggtg
gtcatcttgacgggcggaaacatggcgggtaagagcactaccgcacgcaccagcgcgacg
gccgtgattcttgctcagctgggctgtcgagtgccggcttcacgcgcacgcctctcgccc
gtggaccgcatcgcctcgcgcatgggtgccaacgaccaaatcttccgcaacaacagtacg
ttcatggtcgagatgctcgaggcttcgcgcatcatcagcgagtgtacgccgcgctcgctc
gtcatcatggatgagctgggacgagggactagcacgtttgatgggcaggcgatcgcgttt
gctgtgctgcatcacctggtcagccgcacgcggtgcttgaccttcttcctgacccactac
accaacttggcgtacgacttcaactcctactcgcgcgtcagcaataagcacatgcaggtg
ctggtcgacgatggcaagcgcgaggtcattttcacataccgtctcgtggatggcatcgcc
gagtcttcatacggtacgcaggtggccgcgctggccggcgtgccgcacgagatctgcgat
cgcgccgctgccgtttcaaagcagtttgcggaagccaccaaggcgagccaggccgagaag
aacaagagcgcgatccctctcgccctgctgagcgactttgtgcacctcttcaagctggcc
ggggagccgacgcccgcttccagcgaccgcaatgccgaagccaaagcgctgaccacgctc
tcgcagctcgacatcattcgctctcaagtagctgctctggctcaagcaggatctgccgcc
aagtcactccctagcccacttccaactttgacctctgtcgactcagaggacgagatggcg
gttgacgatcagcaagacgagcccgcccgcctgcttccgccggcggtaaaaaagatcacc
acgtacgctggacgcagtcggcgcgccgtgacggaggatgtcgagcagcagcctctttgc
ttttcgagtcgggaggacgaggacgacgaggaggcgatgccgaaagctgccagcagtccg
attctgtcgtcggtgcatactccgctcttccccacgatgcgtcattcgaagccatcagca
cgcaagacgcaatcgaaagcagtgaaagcagcgacacccgcacttgcacgagagccggaa
caactcatcttggacttgggacagcggatccggatccgttgcaacgaatgcgatatgcag
tacgacacgtcctcggcggaagactgcacgctgcatgcgcgtcatcacgaacgcacagtg
aaaggtctcgactggagcgccaaagcgttgaccgtgtcaggcgagatggcgtcgcagctc
acgttgtcgagacgcaggggacgcggcaaagcagtgctaagcggtaagcagagtgccgcg
ggcagtggtagcgaggctggccaaccagagtcgatcgtgatccgatgctacgacatggcg
gcgttgaaggacgccacagcgacgaggaagatcaacgagctgctgcagacggtggatgac
gcgctgggggctgctccggtcagtgtttcggagattcaaggatgcaaagttctcgtcgcg
atttgcgctggtcgagcagccggtgcggctgtcgtcgggcgcattcccgcgggtcacgcg
cgggaagtgcttccctcgagcggcaacaaggagaacgatgccgttgatgccagttcggcc
gtcgacgatgccggagcagcagcctccaagctgcgtgctaccaccgtgtggaacgacgcc
ggcgacgccatctttgtctctgacgccttaccctcgtccaagacaccacccataggggtg
ttccgcatccacgtcatccctggctggagacgcacgggcatggcgagtgctctgctggat
gcagcggcggacaacagcgtgtatggattcgatctggatgggctcgtcaagacgtacgga
agcagagcgaggtcggttgcgtttagccagccgacggaggccggaaggaagctggcagag
gcatggatccgtaaggacgcgacgaatgctgcggcacgactcgtcgtgttcgaagcttga
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integrated database retrieval system
