Sporisorium graminicola: EX895_005505
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Entry
EX895_005505 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_005505
04131 Membrane trafficking [BR:
sgra04131
]
EX895_005505
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
EX895_005505
Membrane trafficking [BR:
sgra04131
]
SNARE
SNARE associated proteins
Others
EX895_005505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
Motif
Other DBs
NCBI-GeneID:
40728400
NCBI-ProteinID:
XP_029737328
UniProt:
A0A4U7KMN6
LinkDB
All DBs
Position
SGRAM_7:135654..137747
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AA seq
697 aa
AA seq
DB search
MNPHSRYSLGKGASTEHMMRLAQQGSTGHDGSVRSPSIGGAAAMPGAAGPRNLRPSSEML
PNMNHHGTPETEAIDRWFEDLQHYEATLEEMAAASLDQNFKEELSAIEQWFRVLSEAERT
AALYSLLQESTQVQIRFFITVLQQMARSDPVSALLSPSHHNSSMADQMEAKLASLGLKSP
SAMKAPASPGNRGYRQSSDAAGFLSPNVAAMYSPGNADAASTLAAQRAKLKANRTSAPGT
LIGESRNYSGGQLDQVQERGGSPNPQQQQQRTLSGDHSRPKSTDLSNNVGRSPRASGPLD
DQLSPISATGNWSSMVNTPLVPMFTDNDKAGSGEANVNLDTAAAQLANLQQQQHLGGNGR
VMVDPDVPRYRRKSNQNTGAGGYGHGSNMFDQSSPGVSPNVGMQSGWGQNDIFGRGGLNT
GPSAFGGNNNNNGGNQFNIPPMSPNALAGLQSPSGGLANPLNMQMMNMMAAMGGLNLNNM
NGAQLLAMQQQLLQNQQTLSVLAQQQQMQQQQQQQQQHGRNIRAFGGGALSPGLGGQAGR
KSPRSGTSPSGRAAALPGSSAGGSSGAGAAGGGANAAGGEEEIADLATLEDVPAWLRQLR
LHKYTPNFETSHWKEMVLMDDKKLEDKGVAALGARRKMLKTFELVRKKYGIKMDGEDEPG
SGVPGSHNDKAAAEGDEAGETNDAQEVDRELGGAASN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaacccacatagtcgctactcgctcggcaaaggcgcgtccaccgagcatatgatgcgt
ctcgcccagcagggcagcacgggccacgacggaagtgttcgcagcccttccatcggcgga
gctgctgccatgccaggcgccgccggcccgcgcaatttgcgtccgagctccgaaatgctt
cccaacatgaaccaccacggcacccctgaaactgaagccatcgaccgctggtttgaggat
ttgcagcactacgaggccacgctcgaagagatggcggctgcctcgctcgatcaaaacttc
aaggaagagctcagcgccatcgagcagtggttccgcgtcctatccgaggccgaacgcacc
gccgccctctacagcctgctccaagagtcgacgcaggtccagattcgcttcttcatcacg
gtgctccagcagatggcccgcagcgacccggtatcggcgttgctctcgcccagccaccac
aacagctcgatggccgaccagatggaagccaagctggctagccttggcctcaagtcgccc
tctgccatgaaggcgcccgcttcgccgggcaatcgcggctaccgtcagtcctcggacgct
gccggcttcctctcgcccaacgttgctgccatgtacagccctggcaacgcggatgccgca
tcgacgcttgctgcacagagggccaagctcaaggccaaccgcacttccgctcccggcacg
ctgatcggtgagagtcgcaactactccggtggtcagctcgaccaggtgcaggagcgcggc
ggctcgcccaaccctcagcaacagcaacagcgcacgctctccggtgaccactcgcgaccc
aagtcgaccgacttgagcaacaatgtcggccgttctccccgcgccagtggtccgctcgac
gaccagctctcgccaatcagcgccaccggcaactggtcgagcatggtcaacacgccgctc
gtgcctatgtttaccgacaacgacaaggccggctccggcgaggccaatgttaatcttgac
actgctgccgctcagcttgccaacctgcaacagcagcaacacctcggtggcaacggccgc
gtcatggttgatccggatgtgccgcgttaccgacgcaagagcaaccagaacacgggtgca
ggcggctacggccatggatccaacatgtttgaccagtcgagccctggcgtctcgcccaac
gtcggcatgcagtctggctggggtcagaatgacatctttggtcgtggcggtctcaatacc
ggcccttcggcttttggtggcaacaacaacaacaacggcggcaaccagttcaacattccg
ccgatgagccctaacgcgcttgcgggcctgcagagcccctcgggtggtcttgccaacccg
ctcaacatgcaaatgatgaacatgatggctgcgatgggcgggctcaatctcaacaacatg
aacggcgcccagctgctcgccatgcagcaacaacttttgcagaatcagcagacgttgtcg
gtgcttgcccagcagcaacagatgcaacagcaacagcagcaacagcagcagcatggccgc
aacattcgagctttcggcggtggagcgctgtcgcctggtctcggaggccaagcaggccga
aagagtccacgcagcggcacctcgccctctggccgagcggccgcgctgcccggctcttct
gctggcggcagtagcggtgctggagctgcgggtggaggagccaacgcggccggaggcgag
gaagaaatcgccgatttggcaacactcgaggatgtgcccgcttggctgcgtcaattgcgt
ctgcacaaatataccccgaactttgagacgagccactggaaggagatggtattgatggac
gacaagaagctcgaggacaagggcgtggcggcgctgggtgcgcgacgcaagatgctcaag
acgtttgagctcgtgcgtaaaaagtacggcattaagatggacggcgaagacgagccaggc
tcgggtgtcccgggcagccacaacgataaggcagcagccgagggcgacgaggcgggagag
accaacgatgcacaggaggtggaccgcgaacttggcggtgctgcttccaattag
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