Sporisorium graminicola: EX895_005508
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Entry
EX895_005508 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgra03041
]
EX895_005508
Spliceosome [BR:
sgra03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
EX895_005508
Other components
Complex C specific factors
EX895_005508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
TIP_N
G-patch_2
Motif
Other DBs
NCBI-GeneID:
40728403
NCBI-ProteinID:
XP_029737331
UniProt:
A0A4U7KN68
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All DBs
Position
SGRAM_7:complement(152702..155761)
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AA seq
1019 aa
AA seq
DB search
MARRKNHPFDQHDHNDDGDTSSDDGRDFQTDDFDDDVNPGSGLGFARQPVRKRMRRTKDQ
AIYGIFGDDDHHVDEQEDGVGRTVRARDAKGRKIDYRAGQAFVPASEGSESKAMSDPRPH
SRSSGDEAGHQQSQEEREDDFQPASFFSTRQGIGSTTQREPRPQREQQPAKESARAGIGA
RAGIGSASTNAEAGLSSRRSGLTSLSMFVSASATRPSDTSVPPRNHTLDAPESEASPVPA
ATTQPSQGDENNASAAEAEDMSAAGLPSSFSAPPRHVAPSAAFQRSTHKAKPDAIPTPKT
SIKFGGKFDPSAYLASMGWTGGGLGKSGQGIVNPIEVQLRPERAGIAYGGLKEKTKQAKD
EARRRGEAVSSDEEERALRRKQERNKKDKEKKTEQRAWTNAEKKPRKPKIEHRTYEQIIA
EIGALPATHSTVGKIYDASSGEMREVSDLATALGRKGVPSAAKAVGADQLPELQHNLRLI
CDTNAQTLTALAREGVQIQDRRRWLTREAEMAQRKKLVEERKIVRVTGVLAIVRQLEETS
VRAASGDDETVLAQFTALIEQLAHEYEDEITELALDEAVVGALTPILSKLWSSWKPLKQP
TLTTSYLSTWRPLLRTQDVRSFMPTNVPATMTPYDTLLWTHWMPPIRSTLNNDWKPHHPS
SAITLLEAWRALLPRFIWDNVIEQIVLPQLRRSIADWDVRTSKWGLEHVVFPWLPVLGVE
RLHEVLAEARRKLRSALKACSVSGGPSRGLGEWKRFYASHVGADEWDTLLLSTVVPRLST
HLSRLTISRRTEDQDMSVLDEVRQWRKVVRRSVLVRVLAAGVFPKWLDVLYEWLKQVSPE
WEGIVAWYTFWRRWWVTESKLIRDDENDDVVDAGFCTGLNLINSALDMPAERRHLLQPAS
FSPPRSQPTVDAPHTTARTPSHATPAHDETATFRTVLAEQLALHDLFLFKTSQVQPTGVT
TTATVWRVSATLPAARAGRGAKSTSSALIYVDDDVVFQHQHSTAQWVPVSIGQLVQSLA
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaggaagaaccatccgttcgatcagcatgaccacaatgacgacggcgacacg
agctcggacgacggccgcgatttccagacggacgacttcgacgacgacgtgaatccagga
tctggtcttggatttgcacgccagcctgttcgcaagaggatgcgcaggacaaaggatcag
gctatttacggcatctttggcgacgacgatcatcacgtcgacgagcaagaagatggggtg
gggaggacggttcgtgctcgagatgcgaaaggaaggaagattgactacagggctggtcaa
gcgttcgtcccagcatccgaaggatcagaatcgaaagccatgtcggatccacggccacac
tcgagatcatccggcgatgaagctggccatcagcaatcacaagaggagcgggaggacgac
tttcaaccagcttcattcttttccactcgccaaggcattggatcgactacacaacgagag
ccccgaccgcaacgagaacaacagcccgccaaggaatccgcaagggcaggcataggcgca
cgagcaggcattggcagcgcatctacaaacgccgaagcaggtctatcttcgcgaaggagt
ggcctcacgtcactctctatgtttgtctctgccagcgcaacgaggccttccgacacgagc
gttccaccgcgcaaccatacattggacgcgccggaatcagaagcctcacctgtacccgct
gccaccacccagccttcacaaggcgatgagaacaatgcttcggcagcagaagcagaagac
atgtccgctgcaggcctgccatcatccttctccgctccaccacggcatgtagcgccttca
gccgccttccaacgctctacccacaaagcaaaaccagacgccattccgacacccaaaacc
agcatcaagttcggcggtaaattcgacccgtccgcctacctcgcctcgatgggctggacc
ggaggcggcctcggcaagtcaggccaaggcatcgtcaacccgatcgaggtgcagctgcga
cccgagcgtgccggcatcgcgtacggtgggctcaaggagaaaactaagcaggccaaagat
gaagcgcggcggagaggcgaggctgtttcgagcgacgaagaagagcgtgcgctgcgtcgc
aagcaggagcggaacaagaaggacaaggagaagaagacggagcagcgcgcgtggacgaat
gcagagaagaagccacgcaagcccaagatagagcatcgcacgtacgagcagatcatcgcc
gaaatcggcgcgctcccggcgacgcacagcacggtgggcaaaatctacgatgcgagcagt
ggcgagatgcgcgaagtgtcggatcttgctacggcgttggggaggaaaggtgtgccctct
gctgcgaaagctgtgggtgcggaccagttgccggagctgcagcataatttgaggttgatc
tgcgataccaatgcgcagacgctcaccgcactggcgagggaaggtgtgcagattcaggat
cgcagacggtggttgacgagggaggccgagatggcgcagcggaagaaattggtggaagag
cggaagatcgtgcgcgtgacaggggttttagccatcgtcaggcagctggaagagacttcg
gtgcgcgcggcgagcggtgacgacgaaaccgtattagcacagtttacagcgctgatcgag
cagctagcacacgaatacgaggacgaaatcaccgaattggcgctcgacgaggctgtggtt
ggggcgctcactcccatcctcagcaagctctggtcgagctggaagcccctcaagcagccc
acgctgaccacctcgtacctgtccacctggcgaccccttctccgcacacaagacgtgcga
tccttcatgcccaccaacgtcccggcaaccatgacaccctacgacaccctactctggact
cactggatgccgccgatccgcagcacgctcaacaacgactggaagccgcaccacccgtcc
tcggcaatcacgctgctcgaagcatggcgcgccttgctaccccgcttcatctgggacaat
gtgatcgaacagattgtgctgccgcaattgcggcgcagcatcgcagactgggatgtgcgc
acgagcaagtgggggctggagcacgtggtgtttccttggctgcccgtgctgggggtggag
cggctgcacgaagtactcgcggaggcgaggcggaagctgaggagtgcgttgaaggcgtgc
agtgtcagtggcggtccgagtcgcgggctgggcgagtggaagcgtttctacgcgtcgcat
gtcggtgcggacgagtgggacacgctgctgctttccacagttgtgcctcgactgtcgacg
cacttgtcgaggttgacgatcagcaggaggacagaggaccaggacatgtccgtgctcgac
gaggtgcgccagtggcgcaaagtggtgcgtcgctccgtgctggtgcgtgtgttggcagcg
ggggtgttcccgaagtggctagacgtgctgtacgagtggctgaagcaggtgtcaccggaa
tgggagggcatcgttgcgtggtacacattctggcgcaggtggtgggtgaccgagtccaag
ctcatccgtgacgacgagaacgacgatgtggtagatgccggcttctgcactggcctgaac
ctgatcaactcggctctcgacatgccagccgaacgacgacacctgctccaaccggcgtca
ttctctccacctcgatcccaacccaccgtcgacgcacctcacactaccgcacgaacacca
tcccacgccacgcccgcgcacgacgaaacagcgacattccgcaccgtgctcgccgagcaa
ctggccctgcacgacctgttcctcttcaaaacgtcccaagtccagcccacgggcgtcacc
accaccgcgaccgtctggcgcgtctccgccaccctccccgccgcgcgcgccgggcgtggc
gcgaaatccacatcctcagccctgatctacgtcgatgacgacgtcgtcttccaacaccag
cacagcaccgcccagtgggtgcccgtctcgatcggccagctcgtccagtcgcttgcctga
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integrated database retrieval system
