Sporisorium graminicola: EX895_005874
Help
Entry
EX895_005874 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
sgra
Sporisorium graminicola
Pathway
sgra03018
RNA degradation
sgra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EX895_005874
09123 Folding, sorting and degradation
03018 RNA degradation
EX895_005874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_005874
03041 Spliceosome [BR:
sgra03041
]
EX895_005874
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EX895_005874
mRNA degradation factors
5'-3' decay
Lsm complex
EX895_005874
Spliceosome [BR:
sgra03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
EX895_005874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
40728769
NCBI-ProteinID:
XP_029736779
LinkDB
All DBs
Position
SGRAM_8:complement(265262..265552)
Genome browser
AA seq
96 aa
AA seq
DB search
MSALQQYANQRVLVLTQDGRVLVGTLRGSDSVGSIILASSIERIFSADEGVEEVPLGLYV
LRGDSICLVGPLDSEKDKAVDWTKVMAEPIAETRHV
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgctgcagcagtacgccaaccagcgcgtgctcgtgctcacgcaagacgggcgc
gtcctcgtcggcacgctccgcgggtcggactcggtaggtagcatcatcctcgcctcatcc
atcgagcggatattcagcgccgacgagggcgtggaggaggtgccgctcgggctgtacgtg
ctgcgcggagacagcatctgcctggtagggcccctggatagtgaaaaagacaaggcggtg
gattggacaaaagtcatggccgagccgatagcggagaccaggcatgtttga
DBGET
integrated database retrieval system