KEGG   Sporisorium graminicola: EX895_005874
Entry
EX895_005874      CDS       T09331                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
sgra  Sporisorium graminicola
Pathway
sgra03018  RNA degradation
sgra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sgra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EX895_005874
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EX895_005874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgra03019]
    EX895_005874
   03041 Spliceosome [BR:sgra03041]
    EX895_005874
Messenger RNA biogenesis [BR:sgra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     EX895_005874
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     EX895_005874
Spliceosome [BR:sgra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    EX895_005874
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 40728769
NCBI-ProteinID: XP_029736779
LinkDB
Position
SGRAM_8:complement(265262..265552)
AA seq 96 aa
MSALQQYANQRVLVLTQDGRVLVGTLRGSDSVGSIILASSIERIFSADEGVEEVPLGLYV
LRGDSICLVGPLDSEKDKAVDWTKVMAEPIAETRHV
NT seq 291 nt   +upstreamnt  +downstreamnt
atgtctgcgctgcagcagtacgccaaccagcgcgtgctcgtgctcacgcaagacgggcgc
gtcctcgtcggcacgctccgcgggtcggactcggtaggtagcatcatcctcgcctcatcc
atcgagcggatattcagcgccgacgagggcgtggaggaggtgccgctcgggctgtacgtg
ctgcgcggagacagcatctgcctggtagggcccctggatagtgaaaaagacaaggcggtg
gattggacaaaagtcatggccgagccgatagcggagaccaggcatgtttga

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