Sporisorium graminicola: EX895_006020
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Entry
EX895_006020 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_006020
03041 Spliceosome [BR:
sgra03041
]
EX895_006020
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
EX895_006020
Spliceosome [BR:
sgra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
EX895_006020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
40728915
NCBI-ProteinID:
XP_029736925
UniProt:
A0A4U7KL72
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All DBs
Position
SGRAM_8:complement(721927..723348)
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AA seq
473 aa
AA seq
DB search
MTYVPAQTGPVTSSSPSSQRVNMAMVLRPLVHVANLPATTTERDLREMFGSLGTIQSAKV
VTSRAAGGLAYGFVEYVDLASAERAIRTMDGWLWFGTPIKVCWARHSMHPDAVAESMDAE
RAVAMRSSAGNAHLFVGDLAPEVDDGVLRAFFSRFASLVDVRVMYDPETGKSRGFGFISF
RSKGDAEECIALTQGQWLGGRQIRINWASQKNQNQSAASASPAATGLVSSSSSSHPDLPA
LAQRQASNLSITSSAPSGYATPSTPPSYDPASTMPLLPRRHTTLASQPRLPSSLPTTLNQ
PANTAKYNYDAVLAEAPASQTSVYVGNISPLTTQQDLIRIFAPFNHGQPLEARIPPPPGR
GYGFVTLASHEQAASAICSLSIQGVFLHSRWLRFGWQKERGPLQPTLQHRAESAPEAMLY
TLHRQAPPQTGQQQQQQQQQQPRSAPPIPQASRQQASQPPRSSSSSSNEFQPF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacctacgtgcccgctcagacaggccccgtcaccagctccagtccgtcgtcgcagcgt
gtcaacatggctatggtgcttcgaccactcgttcatgtcgccaacctgccggcgacaacg
acggagcgcgacctacgcgagatgtttggctcgctaggcacgattcagtctgccaaagtg
gttaccagccgggctgcggggggtctggcgtatgggttcgtagagtacgtagatctggct
tccgccgagcgcgcgattcggaccatggatggctggctgtggttcggcacgcccatcaag
gtgtgttgggccaggcacagtatgcatccggacgccgtggccgaatcgatggatgcagag
cgagctgttgccatgcgtagcagcgctggcaatgcgcatctgtttgtgggggatctcgct
cctgaagtggatgatggcgtccttcgggcgtttttttcgagattcgcttcattggttgat
gtgagggtcatgtacgatccggagacgggcaagtctaggggctttggctttatcagcttt
cgaagcaagggcgacgcggaggagtgtattgcgctgacacagggccagtggttgggcggt
cgtcagatccgcatcaattgggccagccaaaagaaccagaaccaatcggccgcgagtgca
tcgccagcggctacagggttggtgtcctcctcatcgtcatcccatccagaccttccagcc
ctcgcccagcgacaagccagtaacctgtcaatcacatcatctgcgccatcgggctacgct
acaccctccaccccgccctcgtacgacccagcctccaccatgccgctcctcccacgccgt
cacacgaccctcgcatcccaaccgcgcctcccatcgtccctccccaccactctcaaccaa
cctgccaacacggccaaatacaactacgacgcagtgctcgccgaagcacccgcctcgcag
accagcgtgtacgtcggcaacatttcgccgctgacgacgcagcaagacctcattcgcatc
tttgcgcccttcaaccacgggcagcctctcgaggctcgcatcccgcccccgcccgggcga
gggtacggattcgtcacgctggcgagccacgagcaggcggcgagcgccatctgctcgcta
agcatccagggtgtgtttctgcatagtcggtggttgcggtttggatggcagaaggagagg
ggtcctttgcaacccacgctgcagcatcgcgcggaaagcgcgccggaggcgatgctgtat
acgctacatcggcaggccccaccgcagacgggacagcagcagcagcagcagcagcagcaa
caaccacgatccgcaccgccaataccgcaagcgtcccgacagcaagcttcccaaccacca
cgctcctcgtcctcatcatcgaacgagtttcaaccgttctag
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