Schistocerca gregaria (desert locust): 126266986
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Entry
126266986 CDS
T08688
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126266986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgre03041
]
126266986
Spliceosome [BR:
sgre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
126266986
Complex C
U5 SnRNP specific factors
126266986
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_PRP39_C
TPR_16
Suf
HAT_Syf1_CNRKL1_N
TPR_17
FAT
Iml2-TPR_39
TPR_9
Wzy_C_2
NatA_aux_su
CAF1A_acidic
DUF4404
Motif
Other DBs
NCBI-GeneID:
126266986
NCBI-ProteinID:
XP_049827682
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All DBs
Position
4:259312426..259385012
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AA seq
937 aa
AA seq
DB search
MAVPPAALVNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPS
KRKKGHQKEEEEDDDEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEK
RKEYREKRLKEELERYRQERPKIQQQFSDLKRGLVNVTEDEWRNVPEVGDARNRKMRNPR
SEKFTPLPDSVLARNLGGETTTSLDPSSGIASAFPGTTTPGFSTPGMLTPTGDLDLCKIG
QARNTLMNVKLSQVSDSVEGQTVVDPKGYLTDLQSMIPSYGGDINDIKKARLLLKSVRET
NPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPKSEDLWLEAARLQPPDTARAVIAQ
AVRHIPTSVRIWIKAADLETEIKAKRKVYRKALEHIPNSVRLWKAAVELEDPEDARILLS
RAVECCPTSVDLWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEANGNNHMVE
KIIERAITSLSSNGVEINREHWIKEAIEAEKSGSVHCCQVLIRTIIGHGVEEEDRKHTWM
DDAESCAQQGAYECARAIYAHALATFPSKKSIWLRAAYFEKNHGTRDSLEALLQRAVAHC
PKSEVLWLMGAKSKWMAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRL
LAKARASAPTPRVMMKSAKLEWALDNLEQALMLLEEAIKVFPEFPKLWLMKGQIEEQQGK
VDKAWDTYNMGIKKCPTSIPLWRLLSSLEERRGLLTKARSVLEKGRLRNPKCAELWLEAI
RVEFRGGLRDIANTLMAKALQECPTSGILWAEAIFLEQRPQRKTKSVDALKRCEHDPHVL
LAVSKLFWSERKLQKCREWFNRTVKIDSDLGDAWAYFYKFELLNGTEEQQEEVKKRCIAA
EPHHGEAWCKVSKDIRNWRFNTEQILRLVAKDLPIPV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcagttccaccagcagcgttggtgaaccgaaataagaaacattttatgggtgtacct
gctcctcttggatatgttgctggtgttggacgaggtgcaactggtttcacaacacgttct
gatatcggtcctgcccgtgatgcaaatgatgtttcagatgatcggcatgctccaccaagt
aaaagaaaaaaaggtcatcagaaagaggaagaagaagatgatgatgaggatttaaatgat
tccaattatgatgagttttcaggttatggtgggtccttatttagtaaagatccatatgac
aaagacgatgaggaagctgatgctatttatgaagcaattgacaagagaatggatgagaaa
aggaaagaataccgtgaaaaaagactgaaagaggaactggagcgctatcgacaggagagg
ccaaaaattcagcagcaattcagtgatttaaaaagaggtttagtaaatgtgactgaggat
gaatggcgtaatgttcctgaagtaggagacgctcgaaacagaaagatgagaaaccctcgc
tctgaaaaatttactcctcttcccgactctgtacttgcacgaaatttgggaggtgaaaca
actacgtcactggatccgagtagtggaattgctagtgccttcccaggcacaactacaccc
ggattttccacaccaggaatgttaacacctactggagatttggacttgtgcaaaattgga
caagctcgcaacacattgatgaatgtgaagttgagccaagtatcggactctgtagagggc
cagacagtagttgatcctaaaggatacctgacagatcttcagagcatgataccatcatat
ggtggagacataaatgacataaagaaggcacgacttctcttaaagtctgtgcgagagaca
aatccaaaccacccacctgcttggatagcgtcagccagactggaggaggttactggcaaa
gtacaagctgcgaggaaccttattatgaaaggttgtgaggtcaatccaaagtctgaagat
ctgtggctggaagcagctcgactgcaacctccagacactgcacgagctgttatagcccag
gctgttcgccatatacccacttctgtgcggatatggatcaaagctgctgatctggagact
gaaataaaggcaaaacgaaaagtctacaggaaggctcttgaacatatacctaattcagtt
cgactttggaaagctgctgtagagcttgaagacccagaagatgcaaggattttgctcagt
cgtgctgtagaatgctgtccaactagtgttgatctctggcttgcacttgctagattagag
acatatgaaaatgctcgtaaggtcctcaataaagcaagagaaaatatacctactgacaga
cagatttggacaactgctgccaaacttgaggaagccaatgggaataatcatatggtggaa
aagatcattgagagagcaataacatctctgagctcaaatggtgtagaaatcaatcgtgag
cactggattaaagaagcaatagaagctgaaaaatcaggttctgttcactgctgtcaagta
ctgatcagaactataattggacacggtgttgaagaggaagacaggaaacacacttggatg
gatgatgcagagtcttgtgcacaacagggagcatatgaatgtgctcgtgccatttacgcc
catgcacttgcaacttttcctagtaaaaaatcaatctggctccgtgctgcatattttgaa
aagaatcatggcaccagggattctctggaagcactactacagagagcagtagcacattgt
ccaaagtcagaggttctttggttaatgggtgccaaatctaagtggatggctggtgacgta
ccagctgcaagaggaattttatcacttgcctttcaagctaacccaaactcagaagaaatc
tggcttgctgctgtcaaacttgaatcggagaactctgagtatgaacgtgctcgtcgtctg
ctggctaaggctcgtgcatctgcaccaactccaagggtaatgatgaaatctgcaaagctt
gagtgggctttggacaatctagagcaagcacttatgctcttggaagaagctattaaagtg
tttccagaatttcctaaactctggctgatgaaaggtcaaatagaagagcagcaagggaaa
gttgataaggcatgggacacatataacatggggattaagaagtgtcctacttcaattcca
ttatggcgattgttgtcatccttggaagaacgtcgtggtctgttaacaaaagcacgttca
gtactggagaaaggcagattgcgcaatccaaaatgtgctgaactgtggttggaggctata
cgtgttgaatttcgtggtggattacgagacatagccaatactctaatggctaaagcactg
caagagtgcccaacatctggcattttatgggcagaagctattttccttgaacagagacct
cagagaaagacaaaaagtgtggatgcactgaagagatgcgagcatgaccctcatgtactc
cttgctgtctctaagttgttttggtcagagaggaaacttcagaaatgtcgtgagtggttc
aacaggactgtgaagattgactcagatctcggtgatgcatgggcatatttctacaagttt
gaattactcaatggaacagaggagcaacaagaggaggtcaagaagagatgtattgctgca
gagcctcatcacggtgaagcttggtgtaaggtttcaaaggacattcgtaattggcggttc
aatacagaacaaatattgcgtcttgttgcaaaggatcttcccattcctgtgtaa
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