Schistocerca gregaria (desert locust): 126271995
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Entry
126271995 CDS
T08688
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126271995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgre03019
]
126271995
03041 Spliceosome [BR:
sgre03041
]
126271995
Messenger RNA biogenesis [BR:
sgre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126271995
Spliceosome [BR:
sgre03041
]
Complex B
Other components
Prp19-related factors
126271995
Complex C
126271995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_2
TPR_8
TPR_12
TPR_15
RPN7
TPR_10
ARM_TT21_C
NRDE-2
DHR-2_Lobe_A
ARM_TT21
PPR
Motif
Other DBs
NCBI-GeneID:
126271995
NCBI-ProteinID:
XP_049830435
LinkDB
All DBs
Position
5:complement(173478769..173597435)
Genome browser
AA seq
860 aa
AA seq
DB search
MRSYEKEEVELVFNEDDLPYEEEILRNPFSVKHWLRYIEHKKGSPKQTVNIIFERALKEL
PGSYKLWYNYLKLRRRQVKGRCITDPAYEDVNNAFERSLVFMHKMPRIWLDYCQFLMDQC
RITRTRQLFDRALRALPITQHHRVWPLYLKFLKKYDIHETAVRVFRRYLKLCPEDTEDYI
EYLTSIERLDEAAVKLAYIVNKEDFVSKHGKSNHQLWNELCELISKNPDKVRSLNVDAII
RGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEE
LSLSKRMEEAASNLNPTEEDDIDLDLRLARFEHLMERRLLLLNSVLLRQNPHNVHEWHKR
VKLYEGKPHEIINTYTEAVQTVDPKLAVGKLHTLWVSFAKFYEENGQIDDARVVFEKATH
VPYSKVDDLASVWCEWAEMEIRHENFEEALKLMQKATVMPPRKVAYHDESEAVQMRLYKS
LKVWSMYADLEESFGTFKSCKAVYDRIIDLKIATPQIIINYGLFLEEHKYFEEAFRAYEK
GIALFKWPNVYDIWNTYLTKFLKRYGGAKLERARDLFEQCLENCPAKFAKALYLLYAKLE
EEHGMARHAMAVYERATKAVLPEEMFEVFNIYIKKAAEIYGVPKTRQIYEKAIEVLNEEN
SREMCLRFAEMETKLGEIDRARAIYAHCSQMCDPRVTADFWQTWKEFEVRHGNEDTMREM
LRIKRSVQATYNTQVNMMSAQMLSAASNVSGTVADLAPGAKDGMRMLEAKAAQMAQGERN
PQPKGGNILFVRGETQGQERDGVDTTRISNPDEINIDEDDEDEDGESEDGGDDDDIPVEK
QEIPSEVFGGLKKEVNENDD
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagctatgaaaaggaggaagttgagctagtatttaatgaagatgacttgccgtat
gaagaagaaattcttcgtaatcccttttcagttaagcactggctgcgttacattgaacat
aagaaaggaagtccaaaacagactgttaatataatttttgaaagggctctgaaagaattg
cccgggagctataaattatggtacaattacttgaaacttcgcaggcggcaagtaaaggga
aggtgcatcactgatccagcatatgaagatgtcaataatgcatttgaacggtctcttgtt
tttatgcacaagatgcctcgaatatggctagattattgccagttcctgatggatcaatgt
cgcataacaaggacacgacagctgtttgacagggcattgcgtgcattgccaattacacag
caccatcgtgtttggccgttgtacttgaaattcttgaagaaatatgacatccatgaaaca
gctgtgagagtctttagaaggtatttaaagttatgtccagaagatactgaagattatata
gaatatcttacatcaattgaaagactagatgaggcagctgtgaagttagcttacatagtt
aataaagaagattttgtttcaaaacatggaaaatcaaatcatcaactttggaatgaactt
tgtgaattgatatctaaaaatcctgacaaagtgaggtcactaaatgtggatgccattatc
cgaggaggattgcggagatatacagaccagttggggcatttatggaattccttagctgat
tactatgttcgcagtggtctatttgaaagggcccgtgacatttatgaagaagccattcaa
actgtaacaactgtaagggatttcacacaagtatttgatgcatatgcacagtttgaggaa
ttgagtcttagtaagagaatggaagaggcagctagtaatctaaatcctacagaagaagat
gacattgatctcgatttacgtctcgctcgctttgaacatcttatggagcggcgattactg
cttctgaattcagtgttactcagacagaatccacacaacgttcatgaatggcacaagaga
gtgaaactctatgagggtaaaccacatgagataataaacacatacacagaagcagttcaa
acggttgaccccaagcttgcagtagggaaattgcatacactttgggtgtcatttgctaaa
ttttatgaagaaaatggccaaattgatgatgcaagagttgtttttgaaaaagctacacac
gttccatacagtaaagttgatgacttggcatcagtatggtgtgaatgggcagaaatggaa
atcagacacgaaaattttgaggaagcactgaaattaatgcagaaagcaactgtgatgcct
cccaggaaggttgcctatcatgatgaatcagaagctgttcaaatgcggttgtataaatcc
ctgaaagtgtggtccatgtatgcagatttggaagagagttttggtactttcaagtcttgt
aaagctgtttatgaccgtatcatcgatttaaagattgcaactcctcagataataataaat
tatggactgttcctagaagaacacaaatattttgaggaagctttcagggcatatgaaaaa
ggcattgcattgttcaaatggccgaatgtatatgacatatggaatacatacctcacaaag
tttttgaaacgctatggaggtgccaaactcgaacgggcaagagatttgtttgaacagtgc
cttgaaaactgccctgcaaaatttgcaaaagctttgtatcttttgtatgccaagttggaa
gaagaacatggtatggcaagacatgcaatggcagtttatgaaagagcaacaaaggcagtt
ctaccagaagaaatgtttgaagtatttaatatttacatcaagaaggctgcagaaatctat
ggtgttcctaaaacaagacagatatacgagaaggcaattgaagttctgaatgaagaaaat
tctcgagaaatgtgtcttagatttgctgaaatggaaaccaaattgggtgagattgacagg
gcacgtgctatatatgcccactgcagtcaaatgtgtgatcctcgggtaacagcagacttt
tggcagacatggaaagagtttgaagtacgtcatggaaatgaggatacaatgagagaaatg
ttacgaattaaacgcagtgtacaggcgacttataatactcaggtgaacatgatgtcagca
caaatgctttcggctgctagtaatgtatcaggaactgttgcggacctggcacctggagct
aaagatggaatgcgaatgcttgaagcaaaagctgctcaaatggcgcagggtgaaagaaac
ccacaaccaaaaggtggcaacatattgtttgtgcgtggtgagacacaaggtcaggagcga
gacggtgtggatacaactcgtataagcaatcccgatgagattaatattgatgaagatgat
gaggatgaagatggagaaagtgaagatggtggagatgatgatgatattccagtggagaaa
caagaaataccatctgaagtttttggcggcctcaagaaagaagtaaacgaaaatgatgac
tag
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