Schistocerca gregaria (desert locust): 126272662
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Entry
126272662 CDS
T08688
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-B
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126272662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgre03019
]
126272662
Messenger RNA biogenesis [BR:
sgre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126272662
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
ARM_TT21
SRP_TPR_like
SPO22
RPN7
Motif
Other DBs
NCBI-GeneID:
126272662
NCBI-ProteinID:
XP_049831632
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All DBs
Position
5:61460396..61604439
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AA seq
713 aa
AA seq
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MAEREAESEKSKTEAASTPVISEQEREWAQAALADFNKGNFSSCIQYLAKLEAARPQDIK
VLHNKAVAEYYKSELKKTDLFRKNMNLVCSQAHINIEDLDSLEDVEHCVIYYNQAVLLYH
LKQYHAALKIMNKIFSFIEPMEESLAHRVCLLVVELHLCTYQPEKALTLIAYIENQFVST
DTVISSEKEIKPLEKEHKEKKTVSVDAATDAFHLKLLQYRARCFLLTHTLKACKREIKNL
VTSGGRTMATAFLKGNLEYLRGNYRKAIKALSSVPQNTLAFKDCGESTSVLFYNNNGCIH
HYMGKPNLACFYMQKAFQENENALNSLSKPEPVEPYSGRPLFTLGSSRFYELKYNLGICL
LHAGKAVQAFDCLIDAVQVYHMNPRLWLRLAECCIMAHKSSNEHDFNIHARRKDLVQKVI
GAGCHRKIVLASSLNASEQHAQQENQSASVPSITLEFAALCLRNTLVLLPALEAASSIVP
PLTTDTVSVTDNTVSGETCSVGAGANSLDGIPPTPAGVYAAPTAPMAQHEVASLRCSTLA
AAAYVSLCLGDCITALQHSRNLLKQPRLSGAHQLLGHLYCAEALILLDKISEAVEHLQPD
CVKDLSLISPAVEKEGEKDKYDVMTDQSKPLKQWFPTSVPTARVVLQYNLAVAFAIRGEL
DKAGETLKQVWMSKSPSCDVPIHAIMLALYIELQLGHADVARSILKQHSPQYR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcagagagagaagcagaaagtgaaaaatcgaagacggaggcagcttctactcctgtg
atttcggagcaggaaagggaatgggcacaggcagcattagcagactttaataaaggaaat
ttttcgtcatgcattcagtacctagcaaaattagaagcggctcgaccacaggatattaaa
gtgttgcataacaaagcagtggcagagtattacaaaagtgaactaaagaaaacggatcta
ttccgcaaaaatatgaatttagtttgctctcaggctcatatcaacattgaagacctggat
tcattagaagatgtagaacattgtgttatatattataaccaagctgttctcttataccac
ctgaagcagtatcatgcagcactcaaaatcatgaacaaaattttcagctttattgaacca
atggaagaaagtcttgcccatcgtgtgtgtcttcttgttgttgagctgcacttatgcaca
tatcagccagagaaagctttaaccctgattgcatacattgaaaaccagtttgtttcaaca
gacactgtaatatcttctgaaaaggagattaaacctttagaaaaggaacacaaagaaaaa
aagactgtttcagttgatgcagctacagatgcattccatttgaaattattacaatacaga
gctcgttgtttccttctcactcacacattgaaagcatgcaaaagggaaattaagaactta
gttacatctggaggaaggacaatggcaactgcttttctgaaagggaatctggaatatctg
agaggaaattacagaaaagctataaaagccttaagctctgtcccacagaacacactagca
tttaaggattgtggtgaatctacttcagtgttgttttataacaacaatggatgcattcat
cattatatgggcaaaccaaatcttgcctgcttttacatgcagaaagctttccaggaaaat
gaaaatgccttgaatagcctgtcaaaaccagaacctgtggaaccatattctggcaggcct
ctgtttacactgggctcatctcgtttctatgaactgaagtacaatctgggcatttgtctt
ctgcatgcaggaaaagctgttcaggcatttgattgcctcattgatgcagtccaagtgtat
catatgaacccaaggctatggttgcgtcttgctgagtgctgtattatggcacataaatct
agtaatgagcacgacttcaacatccacgcgcgacggaaggatctagtgcaaaaagttatc
ggtgctggctgccatcggaaaattgtactggcctcatcgctcaatgccagtgaacagcac
gcacaacaagagaatcagtctgcgtctgttccttcaattacactggaatttgcagccctc
tgccttcgcaacacattagttcttctcccagcacttgaggctgccagtagcatcgttcct
cctcttacaactgatacagtctcagtaacagacaatacagtttcaggtgaaacttgctct
gtaggtgcaggtgcaaatagccttgatggcataccacctacaccagctggagtttatgct
gcacctacagccccaatggcacagcatgaggtagcgtcattacgatgttctacactagca
gcagctgcatatgtgtctttgtgcctgggagattgtataacagctctacagcatagtaga
aatttgcttaaacagcctcgtctctcaggagcacatcaattgttggggcatctttactgt
gcagaagctcttatacttctcgacaagatttctgaagctgttgaacatctgcagccagac
tgtgtgaaggatttgtccctcatttcaccagctgtagaaaaggaaggtgaaaaggataaa
tatgatgtaatgactgaccagtcaaaaccattaaaacaatggtttccaacatcagtccca
acagctagggtggtgctacagtataatttagcagttgcttttgcgattcgtggagaactg
gacaaagctggtgaaacactaaaacaggtctggatgtcaaagagcccatcctgtgatgtt
cctatacatgctataatgcttgcactctacatagaattgcaattaggtcatgctgatgtt
gcaaggtctatcctgaaacaacattcaccacaatatagatga
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