KEGG   Schistocerca gregaria (desert locust): 126279009
Entry
126279009         CDS       T08688                                 
Name
(RefSeq) THO complex subunit 3 isoform X1
  KO
K12880  THO complex subunit 3
Organism
sgre  Schistocerca gregaria (desert locust)
Pathway
sgre03013  Nucleocytoplasmic transport
sgre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sgre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126279009
  09122 Translation
   03013 Nucleocytoplasmic transport
    126279009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgre03019]
    126279009
   03041 Spliceosome [BR:sgre03041]
    126279009
Messenger RNA biogenesis [BR:sgre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     126279009
Spliceosome [BR:sgre03041]
 Complex C
  Other components
   EJC/TREX
    126279009
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    126279009
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_WDR35_TULP_N Beta-prop_EML eIF2A Tricorn_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_1st RMC1_N CFAP251_N PAC11 NBCH_WD40 Beta-prop_SCAP Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_SPT8 TRM82_WD ASA1 Beta-prop_DCAF12 Beta-prop_ELP1_1st B-prop_COPA_B_2nd Beta-prop_Nup120_160 Beta-prop_VPS8 Beta-prop_NUP159_NUP214 PD40 Cytochrom_D1
Other DBs
NCBI-GeneID: 126279009
NCBI-ProteinID: XP_049835345
LinkDB
Position
6:complement(261321236..261382393)
AA seq 322 aa
MVDFYSNIEELQNYFKTHNKTREYQAHSSKVHSVGWSCDGRRLASGSFDKCVSIFTLDRD
RLNKEFTFRGHGGSVDQLCWHASNTDLLSTASGDKSVRIWDTRTQKCAATILTKGENINI
AWAPDGNTIAVGNKEDLVTFIDTRTHKIKAEEQFHFEVNEIAWNKESNLFFLTNGQGCIH
ILSYPDLELQHVLKAHPGTCICIELDPTGKYFATGSADALVSLWDLEELACLRTFSRLEW
PVRTISFSHDGQLLASASEDLVIDIGEVCSGNKVVDIGVEAATFTVAWHPSQYLLAFACD
DKEAYDRKRDAGTLKVFGFPSE
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtagatttctatagcaatattgaagaattgcagaattacttcaaaacacacaataaa
acacgagaatatcaggcacattcttctaaagtgcattctgttggttggagttgcgatgga
agacgattagcatctggctcttttgataaatgtgtgtcaatatttaccttggatagagac
agactgaataaggagttcaccttccgagggcatggtggtagtgtagaccagctgtgttgg
catgcctctaatactgatctcttaagtacagcaagtggtgataaaagtgttagaatatgg
gacaccagaacccagaaatgtgccgctacaatcttgacaaagggtgaaaacatcaacatt
gcttgggcaccagatggcaatactatcgctgttgggaataaagaggacttggtgacattc
atagatacccgtactcacaagataaaggcggaagaacagtttcattttgaagtaaatgaa
attgcatggaataaagaaagtaatctgttttttctaacaaatggccaaggttgcatacat
atattaagttatccagacctagaactacagcatgtgttgaaagcacatcctggaacttgt
atttgcattgaactagatcctacaggcaaatattttgctacaggatcagctgatgctctt
gtttcactgtgggatttggaagaacttgcatgtttgcggactttttcaagattagaatgg
ccagtgcgcacaatcagctttagtcatgatggccagctcctggcttcagcatcagaagat
ttggtgattgacataggtgaagtttgctcagggaataaagtggtggacattggagttgaa
gcagccacatttacagttgcctggcacccatctcagtatttgctggcctttgcttgtgat
gataaggaagcttatgaccggaaaagagatgctggtacattgaaagtttttggattccca
tctgaatag

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