Schistocerca gregaria (desert locust): 126284615
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Entry
126284615 CDS
T08688
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126284615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgre03019
]
126284615
Messenger RNA biogenesis [BR:
sgre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126284615
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
NCH2
EST1
Motif
Other DBs
NCBI-GeneID:
126284615
NCBI-ProteinID:
XP_049839638
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Position
8:269335090..269444656
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AA seq
726 aa
AA seq
DB search
MNHNASEGKLELEWGNEKLQKAQKQIEENPFDLEAWSLLIREAQTKWIGEMRPLFEKLVT
TFPSAGRYWKIYIEQEMKARNYEKVEKLFQRCLMKVLNIELWKLYLSYVKETKNTLPTYK
EKMAQAYDFALEKIGMDIQSYSIWNDYVNFLKSVEAVGSYAENQKISAVRKVYQRGVINP
MVNIEQLWKDYINFEQNINPIIAEKMSMERSRDYMNARRVAKEFEAVTRGLNRNSPSIPP
MGHPEELKQVDLWKKYIAWEKSNPLRTEDTTLITRRVMFAFEQCLLCLGHHPDIWYEAAQ
FLEQSSKLLTEKGDVTAAKLFSDEAAAVYERATASLLKKNMLLYFAYADFEEGRLKYEKV
HQIYGRFLEIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDSRSRFHVFVAAALME
YYCSKDKNIAFRIFELGLKKFSDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPE
KSVEIWNRFLEFESNIGDLASIVKVEKRRSAVLSQIKEFQGKETAQLVDRYKFLDLYPCT
PGELKAIGYNEVASTASRAFHPLAACSALDEDEAAKVPRPDVSQMIPYKPKANTIPGDHP
VPGGVFPIPPAAAQLCTLLPPPGCFRGPFVAVDLLLEVFNKIQLPDNPPPPIADNGCDTK
LFDLAKSVHWIVDENSEGSISLGNLYTNKRRRRLGAAGGDDSEDDDMTGAPPVNDIYRAR
QQKRVK
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacaacgcatcagaaggaaaactagagttggaatggggaaacgagaaactgcaa
aaggcgcagaagcagatcgaagaaaatccgttcgacctagaggcatggagtctccttatc
cgcgaagctcagaccaagtggattggagaaatgcgtcctctgtttgagaaactagtcacg
acgtttcccagtgctggaagatactggaagatttatatagaacaagagatgaaggcaaga
aattatgagaaagtagaaaagctattccaaaggtgtcttatgaaggtccttaacatagaa
ttatggaagttgtacctgtcctatgtgaaagaaacaaagaatactctcccaacttacaaa
gagaagatggcacaagcatatgattttgcactggaaaaaataggaatggatattcagtct
tattcaatatggaacgattatgtgaatttcttgaagagtgttgaggctgtggggtcatat
gctgaaaatcagaaaatcagtgctgtaagaaaggtttatcagagaggggtaataaatcct
atggtgaatattgaacagttgtggaaggactatattaactttgaacaaaacattaatcca
atcatcgcagaaaagatgtctatggaacgtagtcgtgactacatgaatgctcgtcgtgta
gcgaaagaatttgaagcggtgacaagaggtctaaataggaacagccctagcatacctcca
atgggccatccagaagagttgaagcaggttgacctctggaagaagtacattgcatgggaa
aaatcaaaccctttgcgaactgaggacactactttgattacaaggcgtgttatgtttgct
tttgaacaatgtcttttgtgtttaggacatcatcctgatatctggtatgaggccgcacag
tttcttgagcagagttcaaagcttctaacagagaaaggggatgttacagcagcaaaactg
ttcagtgatgaagctgctgcagtatatgagagggcaacagcttctttgttgaaaaagaac
atgttactctattttgcttatgccgatttcgaagaaggaagactaaaatatgagaaggtg
catcaaatctatggtcgttttcttgagattcctgacattgatccaacactggcctatgta
cagtacatgaagtttgctagacgtgctgaaggaataaaatctgctcgcacagtgttcaag
agagcgagggaagattcacgctctaggttccacgtttttgtagctgctgcattgatggaa
tattattgcagcaaggacaagaatattgctttcagaatatttgaactaggcctaaagaag
ttttcggataaccctgattatatactgtgctatattgactatctttcccacttaaatgag
gataacaacacaagagttctgtttgaaagagtactgtcttctggtagcttagagcctgaa
aagtctgttgaaatctggaatcgttttcttgaatttgaatcaaatattggagacctcgca
agtattgttaaagttgaaaagaggcgaagtgctgttctcagtcagataaaagaatttcaa
ggaaaggaaacagctcagctagtggatagatacaaattccttgatttgtatccctgtact
ccaggtgaactaaaagcaataggatacaatgaagttgcaagcacagcatcgagagcgttt
caccctctggctgcctgctcagctttagatgaagacgaagctgccaaagttcctcggcca
gatgtctcacagatgataccttacaaacctaaagctaataccatacctggtgatcatcct
gtacctggtggtgtattcccgatccctccagcagctgcacagctgtgcaccttacttcca
ccaccggggtgctttcggggaccatttgttgctgttgatttgttgttggaggtcttcaac
aagatacagctgcctgacaatcctccccctcctatagcagataatggatgtgatacaaaa
ctttttgatctagcaaaatcagtgcactggattgttgatgagaactctgagggctcaatc
tccttaggtaacctgtataccaacaagagacggcgaaggctaggagctgcaggtggagat
gatagtgaggacgatgatatgactggtgctccaccagttaatgatatatatcgtgcccgc
caacagaaacgtgttaaatga
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